Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g07470 | ATGAATTCTAAACCCTACTTCTCCAACAACTTCAATGGTTATTATTTTGACCTAAATAGCCCTCCATTCTATAATTTCCCATCTAGTTTCCATCAAAACAACATATCTTTCTCATCTCCATCTCCACCAACTCCAAGAGAAGCTCTTCCTTTACTTAACCTAAACCTAAACCCTACAAAACATGAAGATCTTCTTGAATCTTCCTTCTCTTCCATGGAAATGATGAACATGAAAGAGAAAGAACAACTAAGTATATCATCAAACTCTTTAGATGATGTTGATGATGATGTTACTGTTGCTTTACATCTAGGGCTTCCAAGTATAGCTTCATCTGATTTGGCTTCTGAGAAAGAAGATGATGATGAAAAAGTTGTAACTGTTGCTTCTGAGTGTCCACCAAGTAAAATTAATAGGGGTCAGTATTGGATCCCTACCCCTGCTCAGATTCTTATTGGCCCTACACAGTTTTCATGTCCTCTTTGTTTCAAAACCTTCAACAGATACAATAACATGCAGATGCACATGTGGGGACATGGATCACAATATAGAAAAGGACCAGAATCTCTTCGAGGAACACAACCAACAGCAATGTTAAGACTCCCATGTTATTGTTGTGCCTCAGATTGCAAGAACAACATAGACCATCCAAGAGCAAAGCCACTAAAAGATTTCAGAACACTTCAAACACATTACAAGAGAAAGCATGGAATAAAACCCTTCATGTGTAGAAAGTGTTGCAAAGCATTTGCAGTGAGAGGAGATTGGAGAACTCATGAGAAAAACTGTGGCAAGCTTTGGTATTGTTGTTGTGGGTCAGATTTTAAACACAAAAGGTCACTTAAAGATCATATAAAAGCATTTGGAAATGGACATAAAGCTTATGGGATTGATGATCAAGATGGGTCTGAAATTGAGCAAGAAAATGAATCTTTTCAGTCATAG | 942 | 0.3726 | MNSKPYFSNNFNGYYFDLNSPPFYNFPSSFHQNNISFSSPSPPTPREALPLLNLNLNPTKHEDLLESSFSSMEMMNMKEKEQLSISSNSLDDVDDDVTVALHLGLPSIASSDLASEKEDDDEKVVTVASECPPSKINRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCASDCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCCCGSDFKHKRSLKDHIKAFGNGHKAYGIDDQDGSEIEQENESFQS | 313 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g07470 | 313 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 158 | 178 | IPR013087 | - | |
Vivi2g07470 | 313 | PANTHER | ZINC FINGER PROTEIN WIP2 | 30 | 307 | IPR043584 | GO:0003700|GO:0010468 | |
Vivi2g07470 | 313 | SUPERFAMILY | beta-beta-alpha zinc fingers | 222 | 260 | IPR036236 | - | |
Vivi2g07470 | 313 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 156 | 183 | IPR013087 | - | |
Vivi2g07470 | 313 | FunFam | Zinc finger protein WIP2 | 209 | 291 | - | - | |
Vivi2g07470 | 313 | Gene3D | Classic Zinc Finger | 155 | 178 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g07470 | Vivi-Chr2 | 219196456 | 219199283 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g07470 | 97 | 313 | C2H2 Transcription Factor Family | AT3G57670 | 68.966 | 2.47e-126 | 364 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Vivi2g07470 | None | None | None |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g07470 | - | - | qsa:O6P43_000130 | 439.113 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Vivi2g07470 | 2 | 219196456 | 219199283 | Vivi2g07470 | 2 | 219196456 | 219199283 | ECH | |
Vivi6g04512 | 6 | 146747706 | 146749225 | Vivi2g07470 | 2 | 219196456 | 219199283 | ECH |