Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07467 ATGAATGGTTCAGGTTTAGGTGGTGGTTTTTTGAGTGGTGGGGGTATTTTGGACATTAAATCTCCATTTCATAGGCATGGTAAACAACACCATATGAATATCATGACTGGTTTGGAAAATCAAAATGATAACAAAAATGGTTTAATTGATGTGAAAAATTTGAATGTTGGGTTGAATTTCGGTAAAGGAAAAGCAATTGTTAGCTCGAATGATAATGATATGAGCGAAGACGATGAGGCGGAAGATGGGAATTGCGAGAATTTTTTTGACGGTGGTAAAGGAAAAAAGGGGTCTCCGTGGCAGAGAATGAAGTGGACGGATGATGTGGTTGGGCTGCTTATAGCGGTGGTGAGTTGCGTTGGTGACGATGGGACGATTGGTGGTGGAGATGGTGTTAAGAGGAAGTCAGCTGTTTTACAGAAGAAGGGTAAGTGGAAAACGGTTTCGAAGATAATGATAAGTAAGGGTTGTCATGTTTCGCCGCAGCAGTGTGAGGATAAGTTTAATGATTTGAATAAGAGGTATAAGAGATTGAATGAGATACTTGGTAGGGGAACTTGTTGTCAGGTGGTTGAGAATCCTGCGTTGATGGATTCGATGACGAATTTGTCTGGTAAGGCGAAAGATGATGTTAGGAAGATATTGAGTTCGAAACATTTGTTTTATAAGGAAATGTGTGCTTACCATAATGGACAAAGGGTACCGAGTAGCCACGATCTTGACTTGCATGGTTATTCGTTGGAGCATGGGAAGGACTCAAGAGATAACGATGGCTCTGAGGATGATGATGACGATAACAATGAAAGTGAGGACGATGAGATGGATGATGAGATTAATATTAATGCTCATGGGGATGGAGGGAGGAGGACGGAGGAGTTTTTTCGTGATCGAGATAAATTAAGTGAGGAGGATGGCCATGGCCATGGCCACTCTTGGCCGCCATCTATTAGGATGAAGAAACTTGAGGTTGAAATGGCAAAGGTTTTTCAAGACCCTGCAAAGTCACCGTGGGAGCGAAGAGAATGGATTAAGGCACAACTGTTGCAGCTTCAAGAGCAAAATGCAGAGTACCAAGTCAAGGCTCTTGAGCTTCAGAAACAACGGTTTAAGTGGTTAAGATACTGCAGCAAGAAGGATAGGGAGATGGAGAAGATGAAGATGGAAAACAAGCGAATGAAATTGGAAAATGACCGCAGGATATTGAAACTGAAGCAGAGAGAGCAGGAGGCAGATTTCAGTAGGTCCGAGATGTCCTTAGACGCTGCAACCATCGGTATCAACAAGCAGCAAGGGAGAGAACATATCAACTTGGCTAGACAGCAGTAG 1326 0.4284 MNGSGLGGGFLSGGGILDIKSPFHRHGKQHHMNIMTGLENQNDNKNGLIDVKNLNVGLNFGKGKAIVSSNDNDMSEDDEAEDGNCENFFDGGKGKKGSPWQRMKWTDDVVGLLIAVVSCVGDDGTIGGGDGVKRKSAVLQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQVVENPALMDSMTNLSGKAKDDVRKILSSKHLFYKEMCAYHNGQRVPSSHDLDLHGYSLEHGKDSRDNDGSEDDDDDNNESEDDEMDDEININAHGDGGRRTEEFFRDRDKLSEEDGHGHGHSWPPSIRMKKLEVEMAKVFQDPAKSPWERREWIKAQLLQLQEQNAEYQVKALELQKQRFKWLRYCSKKDREMEKMKMENKRMKLENDRRILKLKQREQEADFSRSEMSLDAATIGINKQQGREHINLARQQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07467 441 PANTHER F16F4.11 PROTEIN-RELATED 15 414 - -
Vivi2g07467 441 MobiDBLite consensus disorder prediction 242 256 - -
Vivi2g07467 441 Coils Coil 375 411 - -
Vivi2g07467 441 MobiDBLite consensus disorder prediction 257 278 - -
Vivi2g07467 441 MobiDBLite consensus disorder prediction 71 100 - -
Vivi2g07467 441 Gene3D - 105 177 - -
Vivi2g07467 441 Coils Coil 345 367 - -
Vivi2g07467 441 MobiDBLite consensus disorder prediction 239 290 - -
Vivi2g07467 441 Pfam Myb/SANT-like DNA-binding domain 102 227 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07467 Vivi-Chr2 219146070 219147902 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g07467 Myb_DNA-bind_4 1.3e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07467 - - psat:127087226 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07467 2 219146070 219147902 Vivi2g07467 2 219146070 219147902 ECH