Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07457 ATGGAGTTCTCAGCAGAAGCTCTAGAAAAAGATCTAAACAACATGAGAAAATACTATGGAAGTGGAAAAACAAAAGAAGCCTCATGGAGAAAATCACAGCTAAACGGTTTGAGAAACTTTGTCAGAGAAAATGAAGAACAAATCTTGAAGGCCCTTAAGAAGGATTTAGGAAAGCATCATGTTGAAGCTTTCAGAGATGAGGTTGGAATATTAAAGAAATCTATAGATTTGGCAATAAAATCCTTCAAACAATGGATGGCTGGCAAAGAGGCTAAACTGCCACAAATAGCACTGCTTTCAAGTGCAGAAATTGTGGCTGAGCCTCTTGGTTTAGTTCTCATTATCTCATCATGGAACTTCCCATTTGGACTGTCCTTGGAGCCATTAATCGGAGCTGTAGCTGCTGGAAACACTGTAGTTCTAAAACCTTCAGAGCTGGCCCCGGCTTCTTCTTCTCTCCTTTCAACTATTCTACCAAATTATTTGGACATTAATGGCATTAAGATCGTTGAAGGGGGACCAGAGGTTGGAGAGATACTCTTACAGCAAAAGTGGAACAAGATTTTCTTCACAGGAAGTGTGCGAGTCGGGAAGTTAGTTATGTCTGCTGCGGTGGAGAATTTGACTCCAGTAACTTTGGAGCTAGGTGGAAAATGTCCTGCACTGGTTGATTCACTATCAACTTCTTGGGACAGAGAGGTGGCGGTGAAACGAATCTTGGGGGCAAAGTATGGTTCTTGTGCAGGACAAGCATGCATAGCAATTGATTATGTTCTTGTAGAAAAGAGATTCAGTTCAACATTGGTGGAATTAATGAAGGAAGGGATTAAGAAAATGTTTGGAGATGATCCAAAAGGTTCTAACACCATTGCAAGGATAGTTAACAAACATCATTCCAACAGAATCAAGGGTTTTCTCAATGATCCTAGGGTCAAAGAATCAGTGGTTTTTGGTGGTTCAATGGAAGATGATGATGAACTATTTATTGAACCAACAATAGTACTGGATCCACCACTTGAATCAGCAATTATGACAGAAGAAATATTTGGTCCCATCCTTCCTATAATTACTGTAGAGAAGATTGAAGACAGTATTGAGTTCATAAACTCAAAGCCTAAACCTCTAGCAATTTATGCCTTCACAAAAAACAAAACTATGCAGAGAAGATTGGTATCTGAAACATCATCTGGAAGTATTGTATTCAATGATGCAATTATACAGTATATAGCGGATACCATGCCATTTGGAGGAGTTGGTGAATGTGGATTTGGCAAGTACCATGGAAAGTTCTCATTTGAAGTGTTCAGTCACTATAAGGCTGTTGCTAGGAGAAGTTACTATACTGATTTTTGGTTCAGGTTTCCTCCATGGAATCTTAACAAGTTTCAACTACTTGAAGAAGCTTACAATTTAAACTACATTGGAATACTTCTTGCTGTGTTGGGATTGAAGAGATCAAAACGTGCATTATATCAGGCTTGTAATTGA 1488 0.3884 MEFSAEALEKDLNNMRKYYGSGKTKEASWRKSQLNGLRNFVRENEEQILKALKKDLGKHHVEAFRDEVGILKKSIDLAIKSFKQWMAGKEAKLPQIALLSSAEIVAEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNTVVLKPSELAPASSSLLSTILPNYLDINGIKIVEGGPEVGEILLQQKWNKIFFTGSVRVGKLVMSAAVENLTPVTLELGGKCPALVDSLSTSWDREVAVKRILGAKYGSCAGQACIAIDYVLVEKRFSSTLVELMKEGIKKMFGDDPKGSNTIARIVNKHHSNRIKGFLNDPRVKESVVFGGSMEDDDELFIEPTIVLDPPLESAIMTEEIFGPILPIITVEKIEDSIEFINSKPKPLAIYAFTKNKTMQRRLVSETSSGSIVFNDAIIQYIADTMPFGGVGECGFGKYHGKFSFEVFSHYKAVARRSYYTDFWFRFPPWNLNKFQLLEEAYNLNYIGILLAVLGLKRSKRALYQACN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07457 495 FunFam Aldehyde dehydrogenase 217 421 - -
Vivi2g07457 495 PIRSF ALDH 1 480 IPR012394 GO:0006081
Vivi2g07457 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 217 421 IPR016163 GO:0016620
Vivi2g07457 495 SUPERFAMILY ALDH-like 13 458 IPR016161 GO:0016491
Vivi2g07457 495 PANTHER ALDEHYDE DEHYDROGENASE 6 484 IPR012394 GO:0006081
Vivi2g07457 495 FunFam Aldehyde dehydrogenase 16 220 - -
Vivi2g07457 495 Pfam Aldehyde dehydrogenase family 5 441 IPR015590 GO:0016491
Vivi2g07457 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 16 439 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07457 Vivi-Chr2 219069257 219071990 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07457 1 485 Aldehyde Dehydrogenase Gene Family AT4G36250 53.196 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07457 K00128 - gmx:100798020 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07457 2 219069257 219071990 Vivi2g07457 2 219069257 219071990 ECH