Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07441 ATGCATCCCTTAACTCTCCCTTCTAACATGTTACTTTCTCTTTCTCCAATTTATCGATTTCTTCAAACATCTTCATGCCTCCATTACCAAATCCAAACCACTTGTTCAATTTCCATACCTAGATGCAGAATCAACCCTAGCATCTTCACAAATAGAAATCAGCATGCGTGTAAAGGAAGAGGTAGCAATAGAATTACTGTAATTGTAAAAGCAAAGCGCGGCGAGTCTCCGTATGAGGTTCTGGGATTGTCTCCTTCCGCATCTGTGGTTGAAATCAAGAAAGCGTATCGGAAACTCGCTCTCAAGTATCATCCTGATGTTAATAAAGAGAAGAATGCACAGGAGAAATTTTTGAGGATAAAACATGCATACAATACGTTGCTAAATTCTCCACGCAGAAAGTATGATTCGGGAAATCGTGGTTCTAATTCTTCTCAAAGAAACCAAAGTTGGAATCCACAAGCTGAAGAAGAGTTTTATGGATTAGGAGACTTCTTTAAGGATCTTCAAGAAGAATTCAAGAACTGGGAAGCCAGTGCGGCTTCACAAGGAAAACCAAAGAGTCTATGGGAGGAATTGTCGGAAATAGGAGAAGAGTTTGTGGAGTTCCTTGAGAAAGAACTCAATATAGTTGATCCAAATGACAATCCTCAAGAAGGAAATCCATCTAATTTATATGGCACAGAGACACCAAATAACAGGAGTCAAGGGGAAGCTCGCAAGGAAAACAAAAGCGTTGAGGATAACCTTGATGAAGTAGAAGCTGCTCTTGCTCAGTTAAAAAAGGAGTTAGGTTTATAG 801 0.3958 MHPLTLPSNMLLSLSPIYRFLQTSSCLHYQIQTTCSISIPRCRINPSIFTNRNQHACKGRGSNRITVIVKAKRGESPYEVLGLSPSASVVEIKKAYRKLALKYHPDVNKEKNAQEKFLRIKHAYNTLLNSPRRKYDSGNRGSNSSQRNQSWNPQAEEEFYGLGDFFKDLQEEFKNWEASAASQGKPKSLWEELSEIGEEFVEFLEKELNIVDPNDNPQEGNPSNLYGTETPNNRSQGEARKENKSVEDNLDEVEAALAQLKKELGL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07441 266 MobiDBLite consensus disorder prediction 211 250 - -
Vivi2g07441 266 SMART dnaj_3 75 132 IPR001623 -
Vivi2g07441 266 ProSiteProfiles dnaJ domain profile. 76 139 IPR001623 -
Vivi2g07441 266 MobiDBLite consensus disorder prediction 235 250 - -
Vivi2g07441 266 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 41 205 - -
Vivi2g07441 266 SUPERFAMILY Chaperone J-domain 25 134 IPR036869 -
Vivi2g07441 266 PRINTS DnaJ domain signature 78 96 IPR001623 -
Vivi2g07441 266 PRINTS DnaJ domain signature 112 132 IPR001623 -
Vivi2g07441 266 PRINTS DnaJ domain signature 96 111 IPR001623 -
Vivi2g07441 266 Pfam DnaJ domain 77 136 IPR001623 -
Vivi2g07441 266 CDD DnaJ 77 129 IPR001623 -
Vivi2g07441 266 Gene3D DnaJ domain 74 182 IPR036869 -
Vivi2g07441 266 MobiDBLite consensus disorder prediction 214 234 - -
Vivi2g07441 266 Coils Coil 236 263 - -
Vivi2g07441 266 MobiDBLite consensus disorder prediction 130 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07441 Vivi-Chr2 218762729 218765380 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07441 78 137 C2H2 Transcription Factor Family AT1G74250 41.791 6.72e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07441 - - gmx:100793601 301.597