Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07440 ATGCATCCCTTAACTCTCCCTTCTAACATGTTACTTTCTCTTTCTCCAATTTATCGATTTCTTCAAACATCTTCATGCCTCCATTACCAAATCCAAACCACTTGTTCAATTTCCATACCTAGATGCAGAATCAACCCTAGCATCTTCACAAATAGAAATCAGCATGCGTGTAAAGGAAGAGGTAGCAATAGAATTACTGTAATTGTAAAAGCAAAGCGCGGCGAGTCTCCGTATGAGGTTCTGGGATTGTCTCCTTCCGCATCTGTGGTTGAAATCAAGAAAGCGTATCGGAAACTCGCTCTCAAGTATCATCCTGATGTTAATAAAGAGAAGAATGCACAGGAGAAATTTTTGAGGATAAAACATGCATACAATACGTTGCTAAATTCTCCACGCAGAAAGTATGATTCGGGAAATCGTGGTTCTAATTCTTCTCAAAGAAACCAAAGTTGGAATCCACAAGCTGAAGAAGAGTTTTATGGATTAGGTAATTTTTTGAGAGATGTTGAAATAACAATAGGAGACTTCTTTAAGGATCTTCAAGAAGAATTCAAGAACTGGGAAGCCAGTGCGGCTTCACAAGGAAAACCAAAGAGTCTATGGGAGGAATTGTCGGAAATAGGAGAAGAGTTTGTGGAGTTCCTTGAGAAAGAACTCAATATAGTTGATCCAAATGACAATCCTCAAGAAGGAAATCCATCTAATTTATATGGCACAGAGACACCAAATAACAGGAGTCAAGGGGAAGCTCGCAAGGAAAACAAAAGCGTTGAGGATAACCTTGATGAAGTAGAAGCTGCTCTTGCTCAGTTAAAAAAGGAGTTAGGTTTATAG 834 0.3897 MHPLTLPSNMLLSLSPIYRFLQTSSCLHYQIQTTCSISIPRCRINPSIFTNRNQHACKGRGSNRITVIVKAKRGESPYEVLGLSPSASVVEIKKAYRKLALKYHPDVNKEKNAQEKFLRIKHAYNTLLNSPRRKYDSGNRGSNSSQRNQSWNPQAEEEFYGLGNFLRDVEITIGDFFKDLQEEFKNWEASAASQGKPKSLWEELSEIGEEFVEFLEKELNIVDPNDNPQEGNPSNLYGTETPNNRSQGEARKENKSVEDNLDEVEAALAQLKKELGL 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07440 277 Gene3D DnaJ domain 74 194 IPR036869 -
Vivi2g07440 277 SMART dnaj_3 75 132 IPR001623 -
Vivi2g07440 277 MobiDBLite consensus disorder prediction 222 261 - -
Vivi2g07440 277 Pfam DnaJ domain 77 136 IPR001623 -
Vivi2g07440 277 Coils Coil 247 277 - -
Vivi2g07440 277 ProSiteProfiles dnaJ domain profile. 76 139 IPR001623 -
Vivi2g07440 277 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 41 216 - -
Vivi2g07440 277 MobiDBLite consensus disorder prediction 130 154 - -
Vivi2g07440 277 MobiDBLite consensus disorder prediction 246 261 - -
Vivi2g07440 277 CDD DnaJ 77 129 IPR001623 -
Vivi2g07440 277 SUPERFAMILY Chaperone J-domain 25 134 IPR036869 -
Vivi2g07440 277 PRINTS DnaJ domain signature 96 111 IPR001623 -
Vivi2g07440 277 PRINTS DnaJ domain signature 112 132 IPR001623 -
Vivi2g07440 277 PRINTS DnaJ domain signature 78 96 IPR001623 -
Vivi2g07440 277 MobiDBLite consensus disorder prediction 225 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07440 Vivi-Chr2 218762721 218765380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07440 78 137 C2H2 Transcription Factor Family AT1G74250 41.791 7.10e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07440 - - gmx:100812972 323.553
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07440 2 218762721 218765380 Vivi2g07440 2 218762721 218765380 ECH