Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07436 ATGGATAAGAAAGGAGAGAAGAAACAGAAGGAACCAAGGTTTGCTTTCATGACAAAGAGTGAAGTTGATCAACTAGAAGATGGATATAGATGGAGAAAATATGGACAAAATGCTGTTGAGAATAGTCCATACCCTAGGAGCTATTATAGGTGTACAACACAGAAGTGTACAGTGAAAAAACGCGTAGAAAGATCATACGAAGACCCAACAACTGTGATAACAACATATGAAGGTCAGCATAATCATCATGTCCCCACTTCTCTACGAGGCAATGCGGCTGCAATGTTCACACCTTCTTTGCTATCTGCACCTACCCCTTTTTCATATGGATCAAACTTCCCTCAAGATTTTCTTCTCCATATGCACCACCATCATAACAACAACACCTTCAATCTCAGTTCTCAACCAAGTAGTGCTAATTCTGCTTCTGTTGCTGGTTCTATTTACTCTCACAACAACAATGTTAGCAACTCTCTTCTTCATCAGTATCAACAACAGCTTGTTCTTGATCAATATGGATTGCTTTGTTGTTTAGAGTGCAATAGATACTTTAACCCAACACAAATAGTGCAAACAATTTCATAA 585 0.3846 MDKKGEKKQKEPRFAFMTKSEVDQLEDGYRWRKYGQNAVENSPYPRSYYRCTTQKCTVKKRVERSYEDPTTVITTYEGQHNHHVPTSLRGNAAAMFTPSLLSAPTPFSYGSNFPQDFLLHMHHHHNNNTFNLSSQPSSANSASVAGSIYSHNNNVSNSLLHQYQQQLVLDQYGLLCCLECNRYFNPTQIVQTIS 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07436 194 SMART WRKY_cls 25 84 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g07436 194 Gene3D WRKY domain 10 86 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g07436 194 FunFam WRKY transcription factor 57 11 85 - -
Vivi2g07436 194 SUPERFAMILY WRKY DNA-binding domain 17 85 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi2g07436 194 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 5 132 IPR044810 GO:0003700
Vivi2g07436 194 Pfam WRKY DNA -binding domain 26 82 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi2g07436 194 ProSiteProfiles WRKY domain profile. 20 85 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07436 Vivi-Chr2 218732581 218738712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07436 3 90 WRKY Transcription Factor Family AT4G18170 83.146 1.94e-49 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi2g07436 WRKY 3.2e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07436 - - gmx:100787050 232.261