Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07424 ATGCTTTCTTCAAACACCTTTTTGCCAGATTTTTGTGTTCCTAACACAGTAAACCAAGTAACAGATGGTTTTGAGTTGGAAAGTTCAACATCTTCACCTTCATCTTTCACAAGCTCAAATGAAGAATCCTCAGAAGGGTCAAGATACTCTAATAACTTCCTGAGATACATAACTGACATCCTCATGGATGAAGAAGATGAGTTAGAGCGCCAACCCTGCATGTTGCAGGAATGTTTAAGACTCCAAGCTGCTGAAAAATCATTCTATGATGTTCTTGGCCAGAGCTATCCTAATTCATCATGTGATGATACCACTGACCCCGATGGAAATTTTGGTCCCGCCGCTAGTTTTGAGAGCAATAGCAGCAGCTGCACCACTGATAACTCGTATGAATCTAATTGGGTCAATCTTGTCGGAGAAATTGACTCGTCGCCATTACAACTACAAACCCATTTAGTAGAACAAAACTACTATGAGGTGACACAAGCTGATCCAGGTGTCATTGAGTCACAAGCTGCTAATTATTTTCACAATGAAACTTGGAGTTTGAATGATATTCAACCAGTAATGGTTGCAGAGGTTTCAGCTTCACTGGTACCAAGAGAAAAGAGAAGTCATAAGACATATGATAATGATGATACTTCTAATGAAGAAGAGGGAAGAGGTAGCAAGGTTTCAGCTATCTTCTCTGGTGAATTAGAGGCGCCAGAGATATTAGATGAGGTACTTCTTTGTCAGACAGGAAGGACTCAAAACCAACAAGCATCACAAAATGATGATTCAGTTGGAAAGGCAACGGCAACTAGTTCGCGTTCAAAGAAAGTATCTAGAAATAACAATGCCCCAGCTGTGGATTTGTGGACCATGCTAACTCAATGTGCGCAGGCTGTAGCGAACTATGATCAAAGGAATACAAATGAGCTTCTCAATCAGATTAGGCAACATTCTACGCCATTTGGGGATGGGCTCCAGCGTTTAGCTCATTACTTTGCTAATGGTCTTGAGATCAGATTGGCTGCCGAGACACCTACTTATAAGGCGCTTGATGTGGCAACTGCTGGAGATATGCTGAAAGCTTACAAACTATTTGTTACCTCGTCTCCTTTGCAGAGAATGACAAATTTGTTATTAACCAAAACGATTCTCAGTGTGGTGAAGAACGAGAGCAGCATTCATATTATCGATTTTGGAATTTGCTACGGTTTCCAGTGGCCATGCCTAATCAAAACACTTTCATCACGACATGGCGGTCCTCCAAAGCTTCGCATTACGGGAATTGACCTTCCTCAGCCAGGATTTAGGCCTGCAGAGAGGGTGGAGGAAACGGGACGGCGGTTAGGAAACTTCTGCAAGAAGTTCAATGTCCCGTTTGAATACAACAGCATTGCACAGAAATGGGAAACTATCCGGCTCAAGGATCTAAAGATAGACAGGAATGAAACAACTCTTGTTAGCTGTTTGTATAGACTGAAAAACCTTCCTGATGAATCTGTGGCAGTGAATTGTCCAAGAGATGCTGTGTTGAAGTTGATTAAAAAGATTAATCCAAAAATCTTCTTCCATGGAGTTGTCAATGGAAGTTATAGTGCACCGTTTTTCCTGACTCGGTTTAAGGAAGCATTATACCATTTCTCATCATTGTTTGATATGTTTGAGGCTAACGTGCCTCGCGAAGACACACAGAGGACGATGCTTGAGAAAGGGTTGTTTGGAAGGGATGCTATAAATGTAATAGCTTGTGAGGGTGCAGAGAGAGTTGAAAGGCCTGAGACCTACAAGCAATGGCAGATCAGGAACAGGAGAGCAGGGTTCAAACAAATCAGGTTAGATTCTAAGTTAGTGAATGAAACCAAAGCAATGTTGAAGAGGGAATACCATAAAGATTTTGTAGTTGATGAGGATGGTAAGTGGGTTTTGCAGGGATGGAAAGGGCGAATTTTGAATGCTTTTTCTGCTTGGGTTCCTGTTTAA 1971 0.4176 MLSSNTFLPDFCVPNTVNQVTDGFELESSTSSPSSFTSSNEESSEGSRYSNNFLRYITDILMDEEDELERQPCMLQECLRLQAAEKSFYDVLGQSYPNSSCDDTTDPDGNFGPAASFESNSSSCTTDNSYESNWVNLVGEIDSSPLQLQTHLVEQNYYEVTQADPGVIESQAANYFHNETWSLNDIQPVMVAEVSASLVPREKRSHKTYDNDDTSNEEEGRGSKVSAIFSGELEAPEILDEVLLCQTGRTQNQQASQNDDSVGKATATSSRSKKVSRNNNAPAVDLWTMLTQCAQAVANYDQRNTNELLNQIRQHSTPFGDGLQRLAHYFANGLEIRLAAETPTYKALDVATAGDMLKAYKLFVTSSPLQRMTNLLLTKTILSVVKNESSIHIIDFGICYGFQWPCLIKTLSSRHGGPPKLRITGIDLPQPGFRPAERVEETGRRLGNFCKKFNVPFEYNSIAQKWETIRLKDLKIDRNETTLVSCLYRLKNLPDESVAVNCPRDAVLKLIKKINPKIFFHGVVNGSYSAPFFLTRFKEALYHFSSLFDMFEANVPREDTQRTMLEKGLFGRDAINVIACEGAERVERPETYKQWQIRNRRAGFKQIRLDSKLVNETKAMLKREYHKDFVVDEDGKWVLQGWKGRILNAFSAWVPV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07424 656 MobiDBLite consensus disorder prediction 24 47 - -
Vivi2g07424 656 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 227 647 IPR005202 -
Vivi2g07424 656 MobiDBLite consensus disorder prediction 202 224 - -
Vivi2g07424 656 Pfam GRAS domain family 288 653 IPR005202 -
Vivi2g07424 656 ProSiteProfiles GRAS family profile. 277 654 IPR005202 -
Vivi2g07424 656 MobiDBLite consensus disorder prediction 250 278 - -
Vivi2g07424 656 MobiDBLite consensus disorder prediction 202 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07424 Vivi-Chr2 218561090 218564068 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07424 43 656 GRAS Transcription Factor Family AT2G29060 43.302 5.06e-168 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi2g07424 GRAS 7.5e-111 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07424 - - cam:101504630 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07424 2 218561090 218564068 Vivi2g07424 2 218561090 218564068 ECH