Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07423 ATGCTTTCTCCAAACACCTTTGTGCAAGATTTCTGTGTTCCTAACACAGTAAACCCAGAAACAAATGGTTTTGAGTTGGAAGATCCATCATCATCTTCATCACCTTCTTCTGACACAACCTCAAATGGAGGAGGAGGTTCCTTAGACGTGACAAGATACTCCAATCACATCCTCAGATACATAAGTGACATACTCATGGATGAAGAAGATGAGTTGGAGAACAAACCCTGCATGTTGCAGGAATGTTTAAGACTCCAGGCTGCTGAAAAATCATTCTATGATGTTCTTGATCACAACAACCATCCTTCATCAAATGATGACCAAGATGGAAATTTCGGTCGAACTGTTAGTTTTGAGAGCAATAGCGGTGGCAGCTGCACCACTGATAACTCGAATGAATCCGATTGGGTTAACCTTGTTGGAGAAATCGACTCTTCTTCGTTACAACTGCAAACCCCTTTAGTAGAAGAAAACTACTATGATTTGATAGAACCAGATCCAGTTAGCATTGAGTCACAAACTGCAAGCCGTTTTCAAGATGGAACTTGGAGTTGGAATGACATTCAGCCCGTGATTGCGGTTGAGGAAGTTTCGGCTTCGGCTTCGGCTTCGTTAGTAACAAGAGAAAAGAGAAGTCATAGGATGGATGGTGATGATGTTAATTGTAATAATGAACAAGAGGGAAGGGGTAGCAAGCTTTCAGCTAACTTCTCTGATGAATTAGAACCACCAGAGATTTTAGATGAGGTACTATTTTATCAAACAGGAAGGCATCAACTGCAACAAGCACCACAGAATGTTGATTCGGGAGGAAAGGCGATAGTGAGACGCTCGCGTTTGAAGAAAGGATCTACTGATAACGCGGCGGCTGTGGATTTGTGGACCATGCTAACTCAATGTGCGCAGGCAGTGGCGAGCTACGATCAAAGGAATACAAATGAGCTACTCAAGCAGATTAGGCTACACTCTTCGCCTTATGGAGATGGACTCCAGCGTTTAGCTTATTACTTTGCTCAAGGTCTTGAGATCAGATTGGCTGCCGAGACGCCATCGTATGTGCCTGTTGAAGTGGCAACAGCTGGAGATATGTTGAAAGCTTACAAACTCTTCTTTACCGCGTCTCCTTTGCAGAGAATGACGAATGGGTTGATAACCGAAACAATTTTCAGTATAGTGAAGAACGAGAGCAGCGTTCATGTTATCGATTTTGGAATTTGCTATGGTTTCCAATGGCCCTGCCTCATCAAAAAACTTTCAACAAGGCCTGGTGCCAAGCTTCGAATTACGGGAATTGAGATTCCTCAGCCAGGATTTAGACCAGCAGAATGGGTGGAGGAAACTGGACGGCGTTTAGAAAAATACTGCAAGAAGTTCAATGTTCCATTTGAATACAACTGCATTGCACAGAAATGGGATACTATCCGGATAGAGGATTTAAAGATAGACCGGAATGAAATGACTTTTGTTAGCTGTTTGTACAGACTGAAAAATTTGCCTGATGAAACTGTGGCAGTGAATTGTCCAAGAGAAGCTGTGTTGAAGTTGGTCAGGAAGATTAATCCAAAAATCTTCTTCCATGGAGTTGTAAATGGAAGTTATAGTGCTCCGTTTTTTCTGACTCGGTTTCGAGAAGCACTCTACCACTTCTCATCGTTGTTTGATATGTTCGAGGCTAATGTGCCTCGCGAAGACACGCAAAGGTTCATGCTTGAGAAAGGGCTGTTTGGAAAGGATGCTATAAATGTCATAGCTTGTGAGGGTGCAGAGAGAGTTGAAAGGCCTGAGACCTACAAGCAGTGGCAGATCAGGAACAAGAGAGCAGGGTTCAAGCAAATCAGGTTGGATTCTAAGTTGGTGAATGAAACCAAAGTAGTGTTGAAGAGGGAATACCATAAAGATTTTGTAGTTGATGAGGATGGTAAGTGGGTTTTGCAGGGATGGAAAGGCCGTATTTTGAATGCTTTTTCTGCTTGGGTTCCTGCTTAA 1986 0.429 MLSPNTFVQDFCVPNTVNPETNGFELEDPSSSSSPSSDTTSNGGGGSLDVTRYSNHILRYISDILMDEEDELENKPCMLQECLRLQAAEKSFYDVLDHNNHPSSNDDQDGNFGRTVSFESNSGGSCTTDNSNESDWVNLVGEIDSSSLQLQTPLVEENYYDLIEPDPVSIESQTASRFQDGTWSWNDIQPVIAVEEVSASASASLVTREKRSHRMDGDDVNCNNEQEGRGSKLSANFSDELEPPEILDEVLFYQTGRHQLQQAPQNVDSGGKAIVRRSRLKKGSTDNAAAVDLWTMLTQCAQAVASYDQRNTNELLKQIRLHSSPYGDGLQRLAYYFAQGLEIRLAAETPSYVPVEVATAGDMLKAYKLFFTASPLQRMTNGLITETIFSIVKNESSVHVIDFGICYGFQWPCLIKKLSTRPGAKLRITGIEIPQPGFRPAEWVEETGRRLEKYCKKFNVPFEYNCIAQKWDTIRIEDLKIDRNEMTFVSCLYRLKNLPDETVAVNCPREAVLKLVRKINPKIFFHGVVNGSYSAPFFLTRFREALYHFSSLFDMFEANVPREDTQRFMLEKGLFGKDAINVIACEGAERVERPETYKQWQIRNKRAGFKQIRLDSKLVNETKVVLKREYHKDFVVDEDGKWVLQGWKGRILNAFSAWVPA 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07423 661 ProSiteProfiles GRAS family profile. 284 659 IPR005202 -
Vivi2g07423 661 MobiDBLite consensus disorder prediction 96 130 - -
Vivi2g07423 661 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 223 652 IPR005202 -
Vivi2g07423 661 MobiDBLite consensus disorder prediction 105 130 - -
Vivi2g07423 661 MobiDBLite consensus disorder prediction 208 231 - -
Vivi2g07423 661 MobiDBLite consensus disorder prediction 18 48 - -
Vivi2g07423 661 Pfam GRAS domain family 295 658 IPR005202 -
Vivi2g07423 661 MobiDBLite consensus disorder prediction 208 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07423 Vivi-Chr2 218557078 218559862 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07423 53 660 GRAS Transcription Factor Family AT2G29060 41.772 1.54e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi2g07423 GRAS 7.3e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07423 - - cam:101504630 1003.82