Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07422 ATGGATCCAAACTTCCAAACCACCTTCAAATTCGACGACAATGGTAACTTACTCTTTCTCGATGATTTCACCACCACTGATTCTTATTTCTATCTACCTCATGTTCCTCCACCTGATTTTCCTCCGAGTTGTTCTAACTCGGAGCCACTCGTTTCACCCACCACTGATCCTTCCGTTGAAGACACTGATTTTTCAGAAACAGTGAAATACATAAGCCAGATTCTTATGGAAGAGGATTTTCAACAGAAACCCTGCATGTGTTATGACCCTCTTAGTCTCCAACATACTGAGAAAATTTTCTTTGATGCTTTGGAATCAAAACTGCCTCTGCCTCTTTCACCTAATCAACACCCTCTTGATTCTGGTAACAGTTCTGGTTCTAATGAGTTGAAGCCTCTTTCTAGTCCTGATACACCGGTTTCAGGTGATTCTGGTTTTAATTCAGTTTCTTATGTGAAGTCTCAATTTATTGGTTTGAATAGTGATAGTAGTAATAATAATATTAGTGATGGTGTTTTGGATTTGGATTCTTCTGAGACTAAGCTTTTGGCTCAGAATATTTTTAGTGATGCTGATTCTATGTTGCAGTTTAGAAAAGGGTTGGAGGAAGCTAGTAAGTTTCTTCCTCAAAAGCCTCAGCTTTTTACTGGTTTTGATACTGCTAAGACTAGTTTAGTGTCTCAAGAGGCTGAGGGGGGAGTGGGAGGTATAAAGATGGAGGATAGTGTTAGGGAGAATTCAAATTCAAATTCGAATTTGAATTCGAATCCGAGTTATTCGGTTTTGAGTAATTCGAGTTCGTATGGTTTGTTGAAGAGTAGGAAGAATCACGAGCGTCAAGGTAGTGAAGATGAAGAAGGGAGAAGTAACAAACAATCAGCGGTTCGCGTTGAGGAAACTGAAATATCTGAGATGTTTGATAGGGTTTTGCTTAGTGTTGAAAATGTGCCGCTGTGTGCTGAACAGAAGGATGGATCAGTGATGGAGAGTAGCGCAGAGGTTTGTGAGCTTGATGGAGGGAAGGCGCGATCGAAGAAACAAGGGAAGAAAAAGGAAGCTGTGGATTTGAGGACTCTTTTGGTTCTTTGTGCACAAGCTGTGTCTGGTAATGATAACCGGACTGCTAACGAATTGTTTAAGCAGATTCGGCAGCATTCTTCTCCTTCGGGTGATGCTTGTCAGAGGTTGGCTCATTACTTTGCGAATGCGATTGAAGCACGCATGGTTGGTGCCGGTACTGGTACAAAGATATTATATATGAGCCAGAAGATGATTAACGCTGCTGATTACTTGAAAGCATACCAAGTTTTTATATCTGTTTGCCCTTTTAAAAAATTTGCGCATTTCTTTGCAAATAAAATGATACTGAAAACGGCTGAAAAGGCGGAAACACTTCACATTATTGATTTCGGTATCTTATATGGTTTCCAATGGCCAATTCTCATCAAGTTTCTGTCAGAAAGAGATGGTGGACCTCCCAAGCTTCGTATCACCGGAATAGAGTATCCTCAAGCTGGCTTTCGACCGGCTGAGAGAATTGAGGAAACTGGACGGCGTTTAGCTAACTATTGTCAGCGTTTCAATGTTTCCTTTGAATACAAGGCCGTACCATCGCGAAACTGGGAAACCATTCAAGTTCAAGACCTTAATATTAAGAGCGATGAGGTAGTTGCTGTGAATTGTCTGGTAAGGTTTAAGAATTTACATGACGAGACAATTGAAGTGAACAGTCCTAAAGACGCGGTTCTGAAGTTAATCAGGAAGATAAACCCGAGTATATTTGTTCAATCTATAGTAAATGGATCTTACAATGCCCCTTTCTTTGCCACGCGCTTCAAGGAGTCACTTTTCCATTATTCTGCAATGTATGATATGTTTGACACTCTCATACCCCGTAAAAACGAATGGAGGCTGACGATCGAGAAAGAGCTTTTGGGTCGGGAGATTATGAATGTTGTAGCGTGTGAAGGTTTGGAGAGGGTTGAGAGGCCCGAGTCATATAAACAGTGGCAAGTCAGGAATCTACGGGCCGGTTTTAGGCAGCTCCCACTTGATAAGGAGATAATGGTCAAATTTAGAGGTAAGCTAAGAGAATGGTACCATAAAGATTTTGTCTTTGATGAAGATAACAACTGGATGCTTCAAGGTTGGAAAGGCCGCATTTTATATGCATCGACTTGTTGGGTGCCTGCATAA 2196 0.4117 MDPNFQTTFKFDDNGNLLFLDDFTTTDSYFYLPHVPPPDFPPSCSNSEPLVSPTTDPSVEDTDFSETVKYISQILMEEDFQQKPCMCYDPLSLQHTEKIFFDALESKLPLPLSPNQHPLDSGNSSGSNELKPLSSPDTPVSGDSGFNSVSYVKSQFIGLNSDSSNNNISDGVLDLDSSETKLLAQNIFSDADSMLQFRKGLEEASKFLPQKPQLFTGFDTAKTSLVSQEAEGGVGGIKMEDSVRENSNSNSNLNSNPSYSVLSNSSSYGLLKSRKNHERQGSEDEEGRSNKQSAVRVEETEISEMFDRVLLSVENVPLCAEQKDGSVMESSAEVCELDGGKARSKKQGKKKEAVDLRTLLVLCAQAVSGNDNRTANELFKQIRQHSSPSGDACQRLAHYFANAIEARMVGAGTGTKILYMSQKMINAADYLKAYQVFISVCPFKKFAHFFANKMILKTAEKAETLHIIDFGILYGFQWPILIKFLSERDGGPPKLRITGIEYPQAGFRPAERIEETGRRLANYCQRFNVSFEYKAVPSRNWETIQVQDLNIKSDEVVAVNCLVRFKNLHDETIEVNSPKDAVLKLIRKINPSIFVQSIVNGSYNAPFFATRFKESLFHYSAMYDMFDTLIPRKNEWRLTIEKELLGREIMNVVACEGLERVERPESYKQWQVRNLRAGFRQLPLDKEIMVKFRGKLREWYHKDFVFDEDNNWMLQGWKGRILYASTCWVPA 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07422 731 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 286 724 IPR005202 -
Vivi2g07422 731 Pfam GRAS domain family 356 728 IPR005202 -
Vivi2g07422 731 MobiDBLite consensus disorder prediction 242 260 - -
Vivi2g07422 731 MobiDBLite consensus disorder prediction 272 296 - -
Vivi2g07422 731 MobiDBLite consensus disorder prediction 116 144 - -
Vivi2g07422 731 MobiDBLite consensus disorder prediction 271 296 - -
Vivi2g07422 731 MobiDBLite consensus disorder prediction 111 144 - -
Vivi2g07422 731 MobiDBLite consensus disorder prediction 241 260 - -
Vivi2g07422 731 ProSiteProfiles GRAS family profile. 347 729 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07422 Vivi-Chr2 218539010 218541871 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07422 67 731 GRAS Transcription Factor Family AT1G07530 49.364 0.0 626
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi2g07422 GRAS 1.4e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07422 - - cam:101504630 1117.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07422 2 218539010 218541871 Vivi2g07422 2 218539010 218541871 ECH