Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07376 ATGTCATCTTCAAGCGAAGAAGAAGGTTCCTCCTCCACCTTGGTCGCCATTGATATTGACAAGAACAGCAAACATGCTGTAAAGTGGGCTGTTGATCATCTCTTGGAGAAGAGCTCTTCATGCACACTCATTCACGTTAAAACCAAATCCTGCAATCGCAATGAATTTGAATCTGTACCTAAACAAGGCCGTGCGCCAACGGAGGAAGAATTGCATCAGCTTTTTCTTCCTTTTCGAGGATTTTGTGCTCGAAAAGGAATTGTAGCAAAGGAGTTGGTGTTGCAAGACTCGGATGTTTCGAGTGCACTTTACGATTACATTATTGATCACTCGATTGTAGACGTTGTTCTCGGTGCTCCTCGCTGGAATAATGCTCTTATAAGGAAATTTAAAGATGTAGATGTGCCAACAAGCTTAATAAAATCTCTGCCAGTGTCTTGCACAGTTCATATAATATCAAAAGGAAAAGTGCAGAATGTTCAAGCAACAGTTCCTATTCACACCATGACAATTTCTAGTCCTAAGCCAAGTTATTTATCCAAAGATTTACATAGAACATCGTTCGAGCCTAGACTCGGGCGGCGCTTAAGTAACGACGGTGGAACCTTTGGTCAAAACATGGATGCAAGACTAGGATCAAGATGTTTGTCTCAAAGAGATACTTATTCATCAAAAATGTCAATATCAGATGAAAACCAAGATAATGGCACGGAGAGAGAAACAAATAGACTCAAACAAGATCAAAAGTATACAAAGAAGGGTAGGTCTGCGTCGGTTGGTAGAGCAGTCGGTTCTTCGAAACAGAAGGTAATTACTGACATAAAACAAGAAGGAGTAGGAGAAAATGAAGAGAGGATAGGAACATCAAATGAAAATGTAGACAACAGTTATATGTTCAAAACGTATAGTATTGAAGAAATTGAAATTGGAACAAATTACTTTGATCCTGATGGCAAAATTGGTGAAGGTGGATATGGACCTGTTTTCAAAGGAGTACTTGATAACACTGATGTTGCAGTTAAGGCCTTAAGACCAGACATAACTCAAGGGGAGAAGCAATTTCATCAAGAGGTCCTTGTTTTAGGCTCTATAAGACATCCCAACATTGTAGTACTTTTAGGCGCGTGTCCGGAATTCGGGTGCCTCGTATACGAGTACCTAGAGAACGGAAGCTTAGAAGATCGCCTTTATCAAAAGGACAACACGCCTCCGATTCCATGGAGGACTAGATTCAAAATAGCAGCAGAGATTGCAACAGGCCTTCTTTTCCTTCACCAAACAAAACCAGAACCTGTCGTGCATCGCGATCTCAAGCCAGCAAACATTCTCCTAGACAGAAACTACATAAGCAAGATCACCGATGTTGGTTTGGCAAGACTAGTCCCTCCTTCCATCGCCAACAAAACAACTCAATATCATAAGACAGCTGCGGCGGGAACATTTTGCTATATTGATCCGGAGTATCAACAAACGGGACTATTAGGCGTAAAGTCAGACATATATTCATTAGGAGTGATGTTCCTACAGATCATTACTGGAAAGCCTCCAATCGGCGTGGCTCGTCTGGTTGAAGAGGCCATTGAGAACGATAATCTTGCAGCGGTTTTAGATCCAAATGTGGCCGATTGGCCGGTCGAAGAGGCTTTATCATTTGCTAAAATGGCATTGAAGTGCTGTGAGATGAGAAAAAGGGATAGACCAGCTCTTGCTACTGTGATTTTGCCAGAGCTTATTAGACTAAGAGATCTATAA 1752 0.4155 MSSSSEEEGSSSTLVAIDIDKNSKHAVKWAVDHLLEKSSSCTLIHVKTKSCNRNEFESVPKQGRAPTEEELHQLFLPFRGFCARKGIVAKELVLQDSDVSSALYDYIIDHSIVDVVLGAPRWNNALIRKFKDVDVPTSLIKSLPVSCTVHIISKGKVQNVQATVPIHTMTISSPKPSYLSKDLHRTSFEPRLGRRLSNDGGTFGQNMDARLGSRCLSQRDTYSSKMSISDENQDNGTERETNRLKQDQKYTKKGRSASVGRAVGSSKQKVITDIKQEGVGENEERIGTSNENVDNSYMFKTYSIEEIEIGTNYFDPDGKIGEGGYGPVFKGVLDNTDVAVKALRPDITQGEKQFHQEVLVLGSIRHPNIVVLLGACPEFGCLVYEYLENGSLEDRLYQKDNTPPIPWRTRFKIAAEIATGLLFLHQTKPEPVVHRDLKPANILLDRNYISKITDVGLARLVPPSIANKTTQYHKTAAAGTFCYIDPEYQQTGLLGVKSDIYSLGVMFLQIITGKPPIGVARLVEEAIENDNLAAVLDPNVADWPVEEALSFAKMALKCCEMRKRDRPALATVILPELIRLRDL 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07376 583 SMART serkin_6 314 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07376 583 FunFam Os07g0541700 protein 387 479 - -
Vivi2g07376 583 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 287 386 - -
Vivi2g07376 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Vivi2g07376 583 CDD STK_N 15 155 - -
Vivi2g07376 583 Gene3D HUPs 12 152 IPR014729 -
Vivi2g07376 583 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 14 122 - -
Vivi2g07376 583 SUPERFAMILY Protein kinase-like (PK-like) 294 572 IPR011009 -
Vivi2g07376 583 MobiDBLite consensus disorder prediction 191 210 - -
Vivi2g07376 583 MobiDBLite consensus disorder prediction 232 254 - -
Vivi2g07376 583 MobiDBLite consensus disorder prediction 221 267 - -
Vivi2g07376 583 ProSiteProfiles Protein kinase domain profile. 314 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07376 583 Pfam Protein kinase domain 317 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07376 583 Gene3D Phosphorylase Kinase; domain 1 292 386 - -
Vivi2g07376 583 Gene3D Transferase(Phosphotransferase) domain 1 387 582 - -
Vivi2g07376 583 PANTHER OS02G0152300 PROTEIN 282 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07376 Vivi-Chr2 218055452 218058039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07376 281 583 Receptor kinase-like Gene Family AT5G12000 65.347 3.25e-147 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Vivi2g07376 Pkinase 7.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07376 - - gmx:100802306 721.85