Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07375 ATGGCGTACCAGACCCCCAATCACGATTCACCTTCCGATTCCAATACCCAAAAACGTCTCTACAATCCCTACAAAGACCTCGAAGTCCCCATTCGAAACCTCTACCAACTCCCCACCTCACCCGAACACCTTTTCGTCGAAGAGGCCGCCCGAAAACACCGCTCCTGGGGTGAAACCCTAACCTTCCTCACCGGCTGCGGCTACCTCGGCGGCGCCGTTGCTGGCGCCGGCGTAGGCCTCGTCGAAGGCGTTAAATCGTTCGAGTCAGGAGACACCATGAAGCTCAGAGTCAATCGGATTCTCAATTCGTCTGGTCACACCGGTCGAACATGGGGGAACCGCCTCGGAGTGATCGGGTTGCTTTACGCAGGAATTGAGAGCGGGATCACGGCTGCGAGAGACACCGACGATGTGTTGAACAGTATAGCGGCGGGGCTTGGGACTGGCGTGTTGTATCGAGCTACGAGAGGGGTTAGATCGGCTGCTGTGGCGGGTGCTGTTGGTGGAGTTGTGGTCGGAGTGGCTGTAACGGCGAAGCAGGCGTTGAAACGATACGTGCCGATTTGA 567 0.5732 MAYQTPNHDSPSDSNTQKRLYNPYKDLEVPIRNLYQLPTSPEHLFVEEAARKHRSWGETLTFLTGCGYLGGAVAGAGVGLVEGVKSFESGDTMKLRVNRILNSSGHTGRTWGNRLGVIGLLYAGIESGITAARDTDDVLNSIAAGLGTGVLYRATRGVRSAAVAGAVGGVVVGVAVTAKQALKRYVPI 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07375 188 PANTHER TIM23 30 177 IPR045238 GO:0022857
Vivi2g07375 188 Pfam Tim17/Tim22/Tim23/Pmp24 family 64 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07375 Vivi-Chr2 218037757 218038704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07375 9 188 Chloroplast and Mitochondria Gene Families AT1G72750 69.399 6.32e-78 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07375 K17794 - gmx:100813158 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07375 2 218037757 218038704 Vivi7g03636 7 102084932 102086007 PCT