Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07355 ATGGGACATCACTCTTGCTGCAACAAACAGAAAGTTAAAAGAGGTTTATGGTCACCTGAAGAAGATGAAAAACTCATCAACTACATCACTACTTATGGACATGGTTGTTGGAGTTCTGTGCCTAAACTTGCTGGTTTGCAAAGATGTGGAAAAAGCTGCAGATTAAGATGGATTAATTATTTAAGACCTGATTTGAAACGTGGAAGCTTTTCTCCTCAAGAAGCTGCTCTTATCATTGAACTTCATACCATTCTTGGCAACAGGTGGGCACAGATAGCAAAACATTTACCAGGAAGAACTGATAATGAAGTGAAGAACTTTTGGAATTCAAGCATAAAGAAGAAACTGCTTTCACATGATTTTGTTCCTTCTTTAACCACATTTTCTGATCATATTCACTGTCCTAGAAATGAAACTTTCTTCCCTTTGTTAAATGACAATCCTATCCTTAATAACAACTCTCATCATCAATATCACCTAGATCATCATCTTTACTTTCCCATCAATCTTCCATCTCCAATCCTACAAGATCAAAATGACCATATCAAGAATATTGATATCAACAACATTTTGAATGCCAATTTTCATAATCCATCTTTGCCAGAAACACTACCTTCTTCCAATAACCTTGTTTCATCTTCTTATGACCAATTTGATACTTGGTCATTCATTCATCATCTCAATCCAAATATTCACCAAAACTTTAATATTGTTGAGAATTTCATCAATAATAATAATCCAAACACAATATGGCAACATCAACATCAGCAGCAGCAGCAACCGCAACCGCAGCAGCAATATGACAATAGTAGTCATCATTTGGTGGAACTTGAACATTCTATTGTCCCAAAAGTTTGTGAAATTGAAACCATCAAGGATAATTTTGTTTCTAGCATCCCATTTTCTTCTTCTGATTCACAACATCATCATCATGATCTTATCCATCAAATTGTGGCTGCAGAAGCCAATAACAATGATGTTCAAGCTGTGGAGTATAATAATATCATGGATGCTCTCATCATGTCATCATCATTACCATCCTCAACTACAACAACAATAACATCTTCATCATCACCACCACTATCATTCTATCAAGCACCAGAAAAAATTCTCACAAAACCTATCCTTCCTTCAACTTGGGAGTCATCATCATCATGA 1158 0.3549 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGSFSPQEAALIIELHTILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHDFVPSLTTFSDHIHCPRNETFFPLLNDNPILNNNSHHQYHLDHHLYFPINLPSPILQDQNDHIKNIDINNILNANFHNPSLPETLPSSNNLVSSSYDQFDTWSFIHHLNPNIHQNFNIVENFINNNNPNTIWQHQHQQQQQPQPQQQYDNSSHHLVELEHSIVPKVCEIETIKDNFVSSIPFSSSDSQHHHHDLIHQIVAAEANNNDVQAVEYNNIMDALIMSSSLPSSTTTTITSSSSPPLSFYQAPEKILTKPILPSTWESSSS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07355 385 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Vivi2g07355 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Vivi2g07355 385 PANTHER MYB DOMAIN PROTEIN 55 1 292 - -
Vivi2g07355 385 FunFam Myb transcription factor 69 116 - -
Vivi2g07355 385 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Vivi2g07355 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Vivi2g07355 385 CDD SANT 17 61 IPR001005 -
Vivi2g07355 385 FunFam MYB transcription factor 6 66 - -
Vivi2g07355 385 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Vivi2g07355 385 Gene3D - 69 116 - -
Vivi2g07355 385 Gene3D - 11 67 - -
Vivi2g07355 385 SMART sant 13 63 IPR001005 -
Vivi2g07355 385 SMART sant 66 114 IPR001005 -
Vivi2g07355 385 CDD SANT 69 109 IPR001005 -
Vivi2g07355 385 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Vivi2g07355 385 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07355 Vivi-Chr2 217575437 217577117 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07355 1 118 MYB Transcription Factor Family AT3G13890 95.763 6.36e-81 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi2g07355 Myb_DNA-binding 1.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07355 K09422 - gmx:102662609 353.214