Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07354 ATGGGTGCTTCTGGAAAATGGTTCAAATCACTTCTTTCTCATAAAAAAATCTCATCTTCAACCCCAACATCTGATCAAGAGAAGAAGATTAATGGTGATAACAAGAGTGGTAGTAGTGCTAAGAAGAAATGGAAGCTATGGAAGTCATCTTCAGAAGGATCTTCTTCTTCAAGTATGAAGAAGAGTGGTGGTGGTACAGCTTCTGTGTGTGACTCTTCGCTTACTGCTGCTGCGGTTGCTGTCGTGGTTCGAGCTCAACCGAAGGATTTTAACCTCATCAGGCAGGAATGGGCGGCGATTCGAATTCAGGCTCTTTTTCGAGCTTTCTTGGCTAGGAGAGCTTTGAGGGCATTGAGGGCAGTGGTGAGGCTGCAAGCTATATTTAGAGGCAGGCAAGTGCGAAAACAAGCCGCGGTTACTCTGAGGTGCATGCAGGCTCTTGTTAGAGTTCAAGCTCGTGTAAGAGCTAGGAATGTCAGGAATTCTCCAGAAGGAAAAGCAGTTCAGCAGTTATTAGACGACCATCGCAACCAAGCTGATTCTGCTAAACTTCATGGATGGTGTGAAATTCCTGGAACTGCAGATGAAGTTAAAGCAAAACTAAGACTGAGGCAAGAAGGAGCAATCAAGAGGGATCGCGCAATGGCCTACTCTCTATCGGCACAGTCAAGAATGAGTGCTAGTCCAAACTCAAAATCAGTGACTCCTCTCAAGCATCATCACAATCGCGACAACAAGAGCTTAGGAAACGGCTTGTTAGAACGCTGGATGGCGAACAAACCATGGGAGAGTCCAATGTCAATCAGGAAGAGTGAAGAACTTGTTCCTACTTTTCAAACAAGAAGGAACGGTATGACAACTAGGATTTCAGCTCTTAAAATCAGTCACCAAACTCCATCCTCTTCCACCATAAGCTCCGAGTACATGAACGACGATAGCGTTATATCGTCTTCATGTACATCTGGATCTCCGTGTATGCCATTCAGCAATAATACTGTTACGGTGGAAGCAAGAGAGGATAAAGATGTACCAAGCTACATGAGTTTGACAGAATCAACTAAGGCTAAACTCAAAGCTTACAGAAGCTCTTCGCAGAATTCTAAGAGACTCACAATGGACGATTGTCTGTCTCATAACACAAATTCAACATTTCTGAATGGATATAACAGTATAAGCAGTTCTGGTTCCGACCCTTCGGTTAACATATGGAAGGATCGTTGTGCAACACCTCTAAGAGCAAGTTACTATCAAAAACGATACGGCGGGAGATAG 1272 0.4403 MGASGKWFKSLLSHKKISSSTPTSDQEKKINGDNKSGSSAKKKWKLWKSSSEGSSSSSMKKSGGGTASVCDSSLTAAAVAVVVRAQPKDFNLIRQEWAAIRIQALFRAFLARRALRALRAVVRLQAIFRGRQVRKQAAVTLRCMQALVRVQARVRARNVRNSPEGKAVQQLLDDHRNQADSAKLHGWCEIPGTADEVKAKLRLRQEGAIKRDRAMAYSLSAQSRMSASPNSKSVTPLKHHHNRDNKSLGNGLLERWMANKPWESPMSIRKSEELVPTFQTRRNGMTTRISALKISHQTPSSSTISSEYMNDDSVISSSCTSGSPCMPFSNNTVTVEAREDKDVPSYMSLTESTKAKLKAYRSSSQNSKRLTMDDCLSHNTNSTFLNGYNSISSSGSDPSVNIWKDRCATPLRASYYQKRYGGR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07354 423 SMART iq_5 117 138 IPR000048 GO:0005515
Vivi2g07354 423 SMART iq_5 94 116 IPR000048 GO:0005515
Vivi2g07354 423 MobiDBLite consensus disorder prediction 49 64 - -
Vivi2g07354 423 PANTHER IQ-DOMAIN 5-RELATED 1 397 - -
Vivi2g07354 423 Gene3D - 92 146 - -
Vivi2g07354 423 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Vivi2g07354 423 MobiDBLite consensus disorder prediction 221 248 - -
Vivi2g07354 423 Pfam IQ calmodulin-binding motif 119 136 IPR000048 GO:0005515
Vivi2g07354 423 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Vivi2g07354 423 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Vivi2g07354 423 MobiDBLite consensus disorder prediction 16 64 - -
Vivi2g07354 423 MobiDBLite consensus disorder prediction 221 235 - -
Vivi2g07354 423 MobiDBLite consensus disorder prediction 28 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07354 Vivi-Chr2 217517896 217520619 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07354 1 405 IQD Protein Family AT1G72670 45.012 1.38e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07354 - - tpra:123894121 544.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07354 2 217517896 217520619 Vivi7g03667 7 102495112 102497596 PCT