Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07338 ATGAACATCAACATTTCAAGAAACAACAACAGCAACGGAGGAACCCCACAGGCTTGTTCTGCTTGTAAATACCAACGTAGGAAGTGCGGTCCAACCTGTATTCTCGCACCATATTTTCCTCACGAGCGTCAAAAACAGTTCCTCAACGCCCATAAATTATTCGGCGTTGGTAAAATCACCAACATGCTTAAGAATGTTCCTCCTGAATCCAGAGATGTAACCATGTCTACTATTGTTTATCAAGCTGATATGCGTGCTTTGGATCCTGTTGGTGGTTGTTATCGACATATTCAGACTCTGCAGGCTCAGATTGATTATTTCACTGTTGAGCTTCATTTTGTTCTTCAACAGCTTGCTATTTGTAGAGCCGCAGCTGCTTCTTCTTCATCCAATCATCATCATTATAATGATATCGTCGTAAATGGTAACGTTAATGGTATCGGTAACGACGATAATAATAATAATATTAATCATAATGATGATGAAGGTGTTATTATCCCTCCTCATCATTATCAACATCAACAGAATTTTGTTGAGGAACAACTGGATGATGTTAATATGTTTCAACCGCAACAGCAACAGCAGATGCAACCGCAGTATGTTGTTGATGATGTTGTCGGGGTTAACCCTAATTATGTTCCTTTGCAAGAGGATCTTAATACGTGGGTGAATTCAATACCGTTGTCGCCGTTAACGTTGCAGGATAATAAAAAGGAGGAGGATGAGGTGGATCAAGAACCTGTTGGTGATAATCGTTTGAATGATGATCAGAAACCTGTTTTTGACCTAAGTAATGAGATGAATTCGTCGGATATCGTCAGAGCTATGATGAAGAGGTATTGTGAATGA 849 0.3958 MNINISRNNNSNGGTPQACSACKYQRRKCGPTCILAPYFPHERQKQFLNAHKLFGVGKITNMLKNVPPESRDVTMSTIVYQADMRALDPVGGCYRHIQTLQAQIDYFTVELHFVLQQLAICRAAAASSSSNHHHYNDIVVNGNVNGIGNDDNNNNINHNDDEGVIIPPHHYQHQQNFVEEQLDDVNMFQPQQQQQMQPQYVVDDVVGVNPNYVPLQEDLNTWVNSIPLSPLTLQDNKKEEDEVDQEPVGDNRLNDDQKPVFDLSNEMNSSDIVRAMMKRYCE 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07338 282 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 172 - -
Vivi2g07338 282 MobiDBLite consensus disorder prediction 234 258 - -
Vivi2g07338 282 Pfam Lateral organ boundaries (LOB) domain 18 113 IPR004883 -
Vivi2g07338 282 ProSiteProfiles LOB domain profile. 17 118 IPR004883 -
Vivi2g07338 282 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07338 Vivi-Chr2 217273660 217275231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07338 17 134 AS2 family AT3G13850 59.322 4.13e-44 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi2g07338 LOB 7.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07338 - - mtr:11423276 289.271