Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07337 ATGAAAACTTCCATGGCAAGCAACATAGCAGAAAGGGTGCAATATCCATTAGACTCTTCCTCCTACAAGATCATCGACGAAATTGGCGCCGGTAACAGCGCTGTCGTCTACAAAGCAATCTGCATCCCTGTAAACTCCACACCAGTTGCTATAAAATCCATAGACTTAGATCGTTCACGCCCCGACCTCGACGATGTTCGACGTGAAGCGAAGACATTATCACTTCTTTCTCATCCCAACATCCTCAAAGCTCATTGTTCCTTCACCATGGACCACCGTCTTTGGGTGGTTATGCCATTCATGGCAGGAGGTTCATTACAGTCCATAATCTCTCACTCTTTCCAAAACGGCTTATCAGAACAATCCATAGCTGTTATTCTCAAAGACACTCTCAATGCTCTTTCTTACCTTCATGGACAAGGTCACCTTCATAGAGATATCAAATCTGGTAACATCCTTGTTGACTCAAATGGATTAGTGAAACTTGCTGATTTTGGTGTTTCTGCTTCCATTTATGAATCTAACAACTCAGTAGGAGTATGTTCTTCTTATTCGTCTTCGTCTTCTAATTCTTCTTCTTCTCTTATGTTTACTGATTTTGCTGGAACTCCTTATTGGATGGCTCCTGAGGTTATCCATTCTCATAATGGTTACAGTTTCAAAGCTGATATTTGGTCTTTTGGGATAACTGCTTTGGAGCTAGCACATGGAAGACCACCACTTTCTCATCTTCCTCCTTCTAAGTCAATGATGCTTAACATCACCAAAAGGTTTAGGTTTTCTGATTTTGATAAATATATTTATAAGGGAAGTGGTGGAAGTAATAAATTTTCTAAGGCTTTTAAGGATATGGTTGCTTCTTGTTTGAATCAAGATCCTACAAAAAGGCCTTCTGCTGAGAAGTTGCTTAAGCATTCGTTCTTTAAGAATTGTAAGGGACCAGAGTTTTTGGTGAAGAATGTGTTGAATGGTTTGCCTAGTGTTGAGAAAAGGTACAAAGAGATCAAAGTTACAATGGGTGCAGACTCAAAGGAGAATGATGATGATGGTGATGATGAGGACTCAGTGGTGAATGTGAAGCAGAGAAGAATTAGTGGTTGGAATTTCAATGAAGATGGGTTGAAACTTGAGCCGGTATTCCCTAAGGATCAGTGCATAGAAGATCATGATGTGGTGAAACAAGTTCGGTTTGAAGAAGAAAATGCGATCCAAGAGGAGGAAGATGTTGCATCATCAGGAACTGTGATTGAGACAAGCCCCAATGATTCTGATGTGGTTGAACTTGATATCGATGATGTTAGTGGTGTTGTGAAGAACCGTGAAGCTACGTTGGCAACTTTGAGTGTGTTGAAAGGGAGCTTGGAACAAGAACTAGGACAGGTGAAGTTTCTGATGAGTCTAATCGGTGGAAATGAAGAGGAGAGTCATGTGGCCGAAAGCGAGGAGAAAACGGTGCAGGAGATCTCTAAGTTGAGGATGGAGTTAGAAACTGAGAGGAAGAAGAATTTGCAGTTGGAGTTGCAGCTTGAGAATATCAAGCTTCACCTAATTTCTTCTACTGTCAATAGTCCTACAAGTTAA 1581 0.4092 MKTSMASNIAERVQYPLDSSSYKIIDEIGAGNSAVVYKAICIPVNSTPVAIKSIDLDRSRPDLDDVRREAKTLSLLSHPNILKAHCSFTMDHRLWVVMPFMAGGSLQSIISHSFQNGLSEQSIAVILKDTLNALSYLHGQGHLHRDIKSGNILVDSNGLVKLADFGVSASIYESNNSVGVCSSYSSSSSNSSSSLMFTDFAGTPYWMAPEVIHSHNGYSFKADIWSFGITALELAHGRPPLSHLPPSKSMMLNITKRFRFSDFDKYIYKGSGGSNKFSKAFKDMVASCLNQDPTKRPSAEKLLKHSFFKNCKGPEFLVKNVLNGLPSVEKRYKEIKVTMGADSKENDDDGDDEDSVVNVKQRRISGWNFNEDGLKLEPVFPKDQCIEDHDVVKQVRFEEENAIQEEEDVASSGTVIETSPNDSDVVELDIDDVSGVVKNREATLATLSVLKGSLEQELGQVKFLMSLIGGNEEESHVAESEEKTVQEISKLRMELETERKKNLQLELQLENIKLHLISSTVNSPTS 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07337 526 FunFam Serine/threonine-protein kinase BLUS1 11 100 - -
Vivi2g07337 526 Coils Coil 478 515 - -
Vivi2g07337 526 SUPERFAMILY Protein kinase-like (PK-like) 19 314 IPR011009 -
Vivi2g07337 526 FunFam Serine/threonine-protein kinase BLUS1 104 354 - -
Vivi2g07337 526 Pfam Protein kinase domain 22 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07337 526 SMART serkin_6 22 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07337 526 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 14 438 IPR047173 GO:0043539
Vivi2g07337 526 ProSiteProfiles Protein kinase domain profile. 22 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07337 526 ProSitePatterns Protein kinases ATP-binding region signature. 28 52 IPR017441 GO:0005524
Vivi2g07337 526 Gene3D Transferase(Phosphotransferase) domain 1 104 357 - -
Vivi2g07337 526 Gene3D Phosphorylase Kinase; domain 1 10 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07337 Vivi-Chr2 217271713 217273675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07337 5 504 MAP Kinase Kinase Kinase Kinase AT4G14480 54.420 1.32e-176 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Vivi2g07337 Pkinase 1.7e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07337 K08835 - gmx:100820227 645.58