Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07312 ATGGACCTCATCCATGGGACAATTGAAGCTACAATCTTCAATGCAACTCCTTACTCTCCTTCATTTCCCTTCAATTGTTTATGCATAAATGGAAAGCCTGCTTATGTGACAATCAAGATAGACAACAAGAAAGTTGCCAAAACAATACAAGAAAGTGAACGTATTTGGAACCAAACATTTCAGATTCATTGTGCTCATCTATCTGATTCAACCATCACCATTACACTGAAAACATCATGTTCCATATTAGGAAAACACCACATCAAGGCACAACAGTTGAAGCAAGAGAGTTTGATTGATGGATTCTTCCCTCTCCTCATGGAAAATGGTAAACCAAATCAAGAACTAAAATTAAGGTTTATATTATGGTTCAAGCCAGCAAATTTGGAACCAAGTTGGTCAAAGCTACTAAATAGTGAAGAGTTTCAAGGGCTAAGGGATGCTACATTCCCACAAAGATCTAACTGTCATGTTAAGCTCTATCATGATGCTCATCATTCACCTACTTTTCAACCTCCTTTAGATATATGTGGATTTCCAAGATTGCTATGGGAAGATGTTTATAAAGCTATTGAGGGTGCAAAGTATTTAGTTTATATTGCAGGCTGGTCTTTCAATCCAAAGATGGTTTTGGTTAGGGATCCTAAAACAGAAATCCCACATGCTAGAGAAATTAAGTTAGGTGACTTGTTGAAGAAGAAAGCGGAAGAAGGTGTTTCTGTAAGGATTATGATTTGGGATGATGAGACATCATTGCCACTTATCAAGAACAAAGGTGTGATGAACACACATGATGAGGATGCATTTGCATACTTTAAACACACAAAAGTAGTATGCAGAAAGTGTCCTAGATTACATCATAAATTCCCAACAATCTTCGCTCATCATCAGAAAACCGTAACCGTGGATACAAAGGCTCCTAACTCTGTCAATGACAGGGAAATTATGAGTTTCTTGGGAGGGTTAGATTTGTGCGACGGTCGATATGATACAGAGAAACATTCGTTGTTTCAAACACTTACTAAGGAATCACATTACCATGATTTCTACCAAACAAGCATTGTTGGAGCAAGCCTCAAGAAAGGAGGTCCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTACCGGCGAGGCGGCTTGGGATGTGTTAACAAATTTTGAACAAAGATGGACAAAGCAATGTGATTCATCACTTCTAGTCCCTGCAAACACCTTACAAAATCTTGTTCCTGTTTCCTCAACCAGCACTTCCATCGAAAGGAATTGGAAAGTTCAAGTATATCGTTCAATCGACCATGTCTCGGCTAGCCAACTATTTCGAAAACTAACAGTTGAGACTAGCATCCATGAAGCTTACGTCGAAGCAATTAGGCGCGCCAATAGGTTTGTATACATTGAAAACCAATATTTCATTGGAGGATGCCATTTGTGGCAGAAAGATACAAACAGTGGCTGCAGAAATTTGATACCTATTGAGATTGCACTCAAAGTAGTCAACAAGATTAAAGCAAGAGAAAGATTTGCAGTGTATATAGTCATGCCAATGTGGCCAGAAGGAGGACCTGAGAGTGAACCAGTTCAAGATATACTGCATTGGACAAGAGAAACAATGACAATGATGTATAAGTTGATTGGAGAAGCAATTATAGAAAGTGGTGAGCCAGGACATCCAAGAGACTACTTGAACTTCTTTTGCCTGGCAAATAGGGAAAAGAAGGAAAATGCAGAATATATTCCTCCACATTCTCCTCATCCTGAAACTGAATATTGGAATGCACAAAAAAATAGAAGATTCATGGTGTATGTTCACTCCAAGCTCATGATAGTGGATGACCTATATATATTAATAGGATCGGCAAATGTGAACCAAAGATCGATGGACGGGCAAAGAGACACGGAGATTGCGATTGGAGGTTATCAAACTCATGAAGGAAATGATGACCACATGACCAAAGGCGATATTCATGCATACAGAATGTCGATGTGGTATGAGCATACAGGGAGAGCTGAGGACTTGTTTTTGAAGCCAGAAAGTTTAGAATGTGTGCAGAGAATGTGTTCAATAGGAGATAAAATGTGGAAAATCTATAGTAGTGAAGAAATTATGGACATGGAAGGTGTGCATCTAGTAACTTACCCTATGACAGTAACAAAAGATGGATCTGTGGAGGACTTAACTAATGGTGGGGAACATTTTCCTGATACAAAATCTCTAGTGAAAGGGAGAAGATCAAAGTTATTACCCTCTGTCATTACTACTTAG 2265 0.3894 MDLIHGTIEATIFNATPYSPSFPFNCLCINGKPAYVTIKIDNKKVAKTIQESERIWNQTFQIHCAHLSDSTITITLKTSCSILGKHHIKAQQLKQESLIDGFFPLLMENGKPNQELKLRFILWFKPANLEPSWSKLLNSEEFQGLRDATFPQRSNCHVKLYHDAHHSPTFQPPLDICGFPRLLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPKTEIPHAREIKLGDLLKKKAEEGVSVRIMIWDDETSLPLIKNKGVMNTHDEDAFAYFKHTKVVCRKCPRLHHKFPTIFAHHQKTVTVDTKAPNSVNDREIMSFLGGLDLCDGRYDTEKHSLFQTLTKESHYHDFYQTSIVGASLKKGGPREPWHDAHACVTGEAAWDVLTNFEQRWTKQCDSSLLVPANTLQNLVPVSSTSTSIERNWKVQVYRSIDHVSASQLFRKLTVETSIHEAYVEAIRRANRFVYIENQYFIGGCHLWQKDTNSGCRNLIPIEIALKVVNKIKARERFAVYIVMPMWPEGGPESEPVQDILHWTRETMTMMYKLIGEAIIESGEPGHPRDYLNFFCLANREKKENAEYIPPHSPHPETEYWNAQKNRRFMVYVHSKLMIVDDLYILIGSANVNQRSMDGQRDTEIAIGGYQTHEGNDDHMTKGDIHAYRMSMWYEHTGRAEDLFLKPESLECVQRMCSIGDKMWKIYSSEEIMDMEGVHLVTYPMTVTKDGSVEDLTNGGEHFPDTKSLVKGRRSKLLPSVITT 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07312 754 Pfam Phospholipase D C terminal 671 743 IPR024632 -
Vivi2g07312 754 Gene3D Endonuclease Chain A 442 645 - -
Vivi2g07312 754 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 599 626 IPR001736 GO:0003824
Vivi2g07312 754 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 120 IPR035892 -
Vivi2g07312 754 PIRSF PLD_plant 3 754 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vivi2g07312 754 SMART pld_4 291 328 IPR001736 GO:0003824
Vivi2g07312 754 SMART pld_4 599 626 IPR001736 GO:0003824
Vivi2g07312 754 Pfam C2 domain 34 105 IPR000008 -
Vivi2g07312 754 Pfam Phospholipase D Active site motif 602 626 IPR001736 GO:0003824
Vivi2g07312 754 Pfam Phospholipase D Active site motif 292 328 IPR001736 GO:0003824
Vivi2g07312 754 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 291 328 IPR001736 GO:0003824
Vivi2g07312 754 PANTHER PHOSPHOLIPASE D 32 736 IPR015679 -
Vivi2g07312 754 Gene3D Endonuclease Chain A 180 421 - -
Vivi2g07312 754 SUPERFAMILY Phospholipase D/nuclease 418 683 - -
Vivi2g07312 754 SUPERFAMILY Phospholipase D/nuclease 145 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07312 Vivi-Chr2 217049941 217053214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07312 26 754 Phospholipase D Gene Family (Wang group) AT1G55180 62.888 0.0 980
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07312 K01115 - gmx:100807431 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07312 2 217049941 217053214 Vivi2g07312 2 217049941 217053214 ECH
Vivi2g07312 2 217049941 217053214 Vivi7g03713 7 103065753 103069349 PCT