Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07260 ATGATGGATTGGAGAAAACTTGGTTTGATTTTATGTACTTTGAATCTCTTACCTTTGGTATGTTATTGTGCAACTTTTGTTCCAGCTGATAATTACCTTATAGATTGTGGATCAACTTCAACTACTTCAGTTGGTAGCCGCAATTTCACTTCTGATACTTTATCTAAGAAGTTGCTTACAACTCAGCAAGAGATTCTTGCTAGTACTTCTGCAAATTCAGTTTCTTCTAAAGATGATGAATCACCACTCTATAAAACTGCAAGGGTTTTCACTGGATCTTCAAAGTACACTTTTCCTATTAACCAAAAGGGGAGACACTGGATCCGGTTTTACTTTTTTCCTTTTATTTATGATAGATACAATTTGAATGCTGCGAAATTCGATGTATCGACGCAAACCATTGTGCTTATTAGTGGTTTGACTATGCAGAAGAATCCTTTTATGAAGGAGTATTCTATCAATGTTACCACTGATGTTCTTGAGATTACATTTAGGCCTTTGGATAGTTCGGTTGCATTTGTGAATGCAATTGAGGTTGTTTCTGTTCCTGATGATCTCATTACCGATGATGCTCTTAACTTGAATCCGTCGACGTCGTATTCGGGTTTGGGGACTCAGGCTTTGGAGACTGTTTGGAGGGTTAACATGGGTGGTCCTGTTGTTGCATCTGGAGTGGACCCTCTTCAGAGAACTTGGGTTTCGGATAAAAAGTTTCTTCTAACATCGAACCTTGCCACTGATGTTTCGAATATTCCTGGCGTTAAGTATGCTTCTGGAGGAGCAACAGAAAATACTGCTCCGTCTAATGTTTATGGTACTGCCGCGGAGATGAACACGAACACGACCGGTGATACTAATCTTAATTTCAATGTGACATGGCAATTTGATGTGGAGCCGGGATTTCAATACCTTGTTCGAGCTCACTTTTGTGATATAGTCAGTAAAGCTCTCAATTTACTTTACTTCAATGTTTATATTGACTCAATGGCAGCTGCTAAGGATCTTGATCTTAGTACTAAAGGAAATAATGTTTTGGGTGCTCCATATTTTATGGATTTGGTTATGCCAGTAGCTGACAGCAATAAACTAAATATAAGTATTGGCCCTTCCACTTTGAATAAGGACGACCCTAATGCTATTTTGAATGGGCTGGAGATCATGAAAATGAACAATTCTATTGGCAGTCTAAGTGCAAATGCGGCGTCTGGTGCTGGAGGTGATTCCTCTGGTTCGAGTTCAAGTCATGTTGGTCTGATAGCTGGTGTGAGTGTTGGTGTAGTGAGTGTATTGGTCTTGGCCGGAGTTTGCTGCATAGTGTGTAGGAAAAGAAGGAGGTTGGCACGACAAAGGCAGTCGAAGACATGGATTCCTTTGTCCGTCAACGATACACATACGATGGGAAGTAAATATTCCAACGGCACAACAATTAGCGCTGCTTCAAACTTTGAGTACCGTGTTCCTTTTGCGGAAGTTAAGGAGGGTACAAACAATTTTGATGAGAGTTGGGTTATTGGGGTAGGTGGCTTTGGGAAAGTCTACAAGGGAGAGTTAAGGGATGGCAGGAAAGTGGCGGTGAAGAGGGGGAATCCACTGTCACAGCAGGGGATTGCTGAATTTAGGACGGAAATTGAAATGCTGTCGCAATTTCGTCATCGCCATTTGGTGTCTTTGATTGGTTATTGTGATGAAAATAATGAAATGATCCTGATATATGAATACATGGAAAATGGAACTCTTAAGAGTCATTTATATGGTTCTGGACTCCCGAGCTTAAGTTGGAAGCAGAGACTTGAGATATGCATCGGATCTGCTAGAGGACTTCATTACCTTCATACCGGCTATGCTAAGGCAGTCATTCACCGTGATGTGAAGTCGGCAAATATCTTACTTGACGAGAACCTGATGGCTAAGGTGGCTGACTTTGGATTGTCAAAGACCGGTCCTGAACTTGATCAAACACACGTGAGCACGGCCGTCAAGGGGAGTTTCGGGTACCTTGATCCAGAATATTTTAGGAGGCAGCAACTGACCGAAAAGTCCGATGTGTATTCCTTTGGAGTAGTTTTGTTCGAAGTTCTTTGTGCAAGGCCTGTTATAGATCCATCACTTCCTAGGGAAAAGGTAAACTTGGCAGAATGGGCTATGAAATTTCTTAAAAAAGGACAGCTTCAACAAATCATCGATACAGCACTTGCAGGGAAAATCAAACCAGAATCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTATGGTGTTGACAGACCTTCAATGGGAGATGTCTTGTGGAATTTAGAGTACGCTCTTCAACTTCAAGAAGCTGAGGTGCAAGGTGATCCTGAAGAAAATAGTACAAACATGATCGGCGAACTCTCTCCACAGGTCAACAACTTCCACCAAGACGCAAATGTTTCTGCTTCTGCTTCGGCTTCTGCTGTACAGTTTGAAACTTCAACTGTAGATGATCTTTCTGGTGTTTCCATGAGTAGGGTATTCTCACAGCTGGTGAAGTCCGAGGGTAGATGA 2535 0.4178 MMDWRKLGLILCTLNLLPLVCYCATFVPADNYLIDCGSTSTTSVGSRNFTSDTLSKKLLTTQQEILASTSANSVSSKDDESPLYKTARVFTGSSKYTFPINQKGRHWIRFYFFPFIYDRYNLNAAKFDVSTQTIVLISGLTMQKNPFMKEYSINVTTDVLEITFRPLDSSVAFVNAIEVVSVPDDLITDDALNLNPSTSYSGLGTQALETVWRVNMGGPVVASGVDPLQRTWVSDKKFLLTSNLATDVSNIPGVKYASGGATENTAPSNVYGTAAEMNTNTTGDTNLNFNVTWQFDVEPGFQYLVRAHFCDIVSKALNLLYFNVYIDSMAAAKDLDLSTKGNNVLGAPYFMDLVMPVADSNKLNISIGPSTLNKDDPNAILNGLEIMKMNNSIGSLSANAASGAGGDSSGSSSSHVGLIAGVSVGVVSVLVLAGVCCIVCRKRRRLARQRQSKTWIPLSVNDTHTMGSKYSNGTTISAASNFEYRVPFAEVKEGTNNFDESWVIGVGGFGKVYKGELRDGRKVAVKRGNPLSQQGIAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTLKSHLYGSGLPSLSWKQRLEICIGSARGLHYLHTGYAKAVIHRDVKSANILLDENLMAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARPVIDPSLPREKVNLAEWAMKFLKKGQLQQIIDTALAGKIKPESLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAEVQGDPEENSTNMIGELSPQVNNFHQDANVSASASASAVQFETSTVDDLSGVSMSRVFSQLVKSEGR 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07260 844 ProSiteProfiles Protein kinase domain profile. 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07260 844 Pfam Malectin-like domain 34 389 IPR024788 -
Vivi2g07260 844 FunFam Putative receptor-like protein kinase 31 183 - -
Vivi2g07260 844 FunFam Receptor-like protein kinase FERONIA 207 391 - -
Vivi2g07260 844 ProSitePatterns Protein kinases ATP-binding region signature. 504 526 IPR017441 GO:0005524
Vivi2g07260 844 Gene3D - 206 391 - -
Vivi2g07260 844 Gene3D - 31 183 - -
Vivi2g07260 844 PANTHER OS07G0166700 PROTEIN 485 775 IPR045272 GO:0004714|GO:0006468
Vivi2g07260 844 FunFam Receptor-like protein kinase FERONIA 574 789 - -
Vivi2g07260 844 CDD STKc_IRAK 504 769 - -
Vivi2g07260 844 Gene3D Phosphorylase Kinase; domain 1 460 573 - -
Vivi2g07260 844 SMART serkin_6 498 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07260 844 Pfam Protein tyrosine and serine/threonine kinase 503 697 IPR001245 GO:0004672|GO:0006468
Vivi2g07260 844 FunFam receptor-like protein kinase FERONIA 462 573 - -
Vivi2g07260 844 SUPERFAMILY Protein kinase-like (PK-like) 474 769 IPR011009 -
Vivi2g07260 844 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Vivi2g07260 844 Gene3D Transferase(Phosphotransferase) domain 1 574 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07260 Vivi-Chr2 216226904 216230366 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07260 9 844 Receptor kinase-like Gene Family AT3G46290 65.036 0.0 1078
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi2g07260 Malectin_like 4.8e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07260 - - gmx:100305416 1211.05