LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g07241	ATGGAGCATTTGAAGAAATCTCCATCTTCATCATCATCTTCATCAATGAGGCCATCATTTCCAAGAGATCCTCGAGGCTCCTTAGAAGTGTTCAATCCAACCAGCAACTCCAGCTCGCCGGTACGCTCACCGTCAAACCTGAAAAATTGGACGGAAACGAAAGAAGAGCAGCGCAAGGAAATCTCCGAGCTACATACTGAATTCTCCGATGAAATCACCAACACTTCATGGATGGCAATCAAGGAAGGAGAAACCGGTGCCGCAGTACAGAGAGCCGCCGAGTGGGGATTGGTGCTCACAACAGATGCTGAAACCGGGAAGCCACAAGGAGTGGCAGTTCGGCATTCCGGTGGAGACGAGCCGAATGTGAAACTTGAAACCAAACGAAACTCCAATAACTCTGTTAGAACTTCCGGTGAGTCTTCCGACGGCGGTGATCCCCGCGGGTTTCCGAGAGTTTCGGAGGATTTGAAAGACGCGTTATCGGCTTTTCAACAAACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATTTTGTATGCAAGTGCGGGTTTCTTCAAAATGACGGGTTATACATCAAAAGAAGTCATAGGAAGAAACTGTCGGTTTTTACAGGGTGCGGATACGGATCCGAATGACGTGGCAAGGATAAGGGAAGCCTTGGAAGGTGGGAAAAGTTTTTGTGGAAGATTACTGAATTACAAGAAGGATGGAACTCCCTTCTGGAATCTTCTCACTATTTCACCCATCAAGGATGATGATGGCAATGTGCTCAAGTTAATTGGAATGCTGGTGGAGGTTAATAAGCATACTGAGGGGTCCAAAGAGAAGAAGCTGCGTCCCAATGGGTTGCCTGAATCCTTAATTCGATATGATGCTCGTCAGAAAGAGAAGGCTACATCTTCTGTAGATGAGTTATTACAGGCCATGAAGCGCCCCCGCGCATTGAGTGAATCCGGACACCGTCCCTTTATCAGAAAATCAGGAGGAGGTGGAGGTTCTGAAGAAGATGAAGAAGCAGAAAGATTAGATAGCAAATCGAGGAGAAAATCTGATAGCGTAGCTTCTTTTAGACCAAAACCACAAGGAAAAGTAAGACATTCTATGGAACGAATCAGTGAGCTGCCTGAAAATAAACAGAAAAACTCTCGACGTGGTTCTTTCATGGGGTTCATGAGGAAAAGTCATTCCATTGACGAAAGCATTGATAATGAAGTTATTGTAGATGTGAGCTCTGGGAGTGAGGAAGATGAGAGGGATGATAGTTTTGAATTTGATGACAGAAAAAAACTGAGGGAAAAAAGAAAAGGTCTTGATCTTGCTACTACACTTGAGCGTATTGAGAAAAACTTTGTCATTACCGATCCAAGGCTTCCAGACAATCCTATAATCTTTGCATCTGATAGTTTCTTAGAGCTTACAGAATATAGTCGTGAAGAAATCTTAGGGAAAAATTGCAGGTTTCTGCAAGGACCAGAAACTGATCCAGCAACTGTGAGAAAAATCCGAGAGGCAATTGACAACCAAACAGAAGTAACTGTGCAACTAATCAATTATACTAAGAGTGGGAAAAAGTTCTGGAACTTGTTTCATTTACAACCTATGCGTGATCATAAGGGAGAAGTACAATACTTCATTGGTGTTCAACTTGATGGTAGTCAACATGTAGAGCCTCTTCACAATTGCATTGCAGAAGACACTGCAAAGGAGGGAGAACTATTGGTAAAAGAAACGGCAGAAAATGTTGGTGAGGCGGTGAAAGAGCTTCCTGATGCTAATCAGAAACCGGACGATTTATGGATGAATCATTCAAAAGTGGTTCGGCCAAAACCTCATAGGAAGGATGATGAAGCTTGGAGAGCAATCCTAAAGGTTGTAGAAAATGGAGAACAGGTAGGCCTAAAACACTTTAGGCCAATTAAACCTTTGGGGTCTGGAGACACCGGAAGTGTGCATCTGGTGGAGCTAGAGGGAACTGGTCATTACTTTGCTATGAAGGCTATGGATAAGGGTGTTATGCTCAATCGCAATAAGGTGCATAGAGCTTGCACTGAAAGAGAAATCCTTGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCTTTCCAGACCAAAACACATGTTTGTTTGATAACTGATTACTATCCTGGGGGAGAACTATTCCTACTTCTTGACCAGCAGCCAACAAAGGTTCTCAAGGAAGATTCTGTTAGATTTTATGCAGCTGAGGTAGTGATTGCGTTGGAGTATCTTCATTGTCTAGGCATAATTTACCGGGATTTGAAGCCAGAAAATGTGCTGATCCAGAGCGACGGACATGTGTCTCTAACAGATTTTGATTTATCATGTTTAACATCTTGCAAGCCACAGCTTATACTTCCAGCTACTGAGGAAAAGAAGAAGAGGAAGAAGAAAAATAAGGGACAGCAGAAAAATCAAGAGGTTCCATTGTTCATGGCAGAACCAATGAGAGCGTCCAATTCTTTTGTTGGCACGGAAGAGTACATAGCTCCGGAAATTATAACTGGTTCAGGTCATACTAGTGCCGTGGATTGGTGGGCTCTAGGTATTCTTCTATATGAAATGCTCTACGGATATACACCATTCAGAGGAAAGACGAGACAAAAGACATTTGCAAACATTCTTCACAAAGATCTTAAGTTTCCCAAAAGCAAACCGGTAAGTCCCCACGGAAAGCAATTAATTTACTGGCTATTGCACAGAGATCCCAAAAACAGACTGGGTTCACTTGAAGGAGCAAATGAAATTAAGAACCATCCATTCTTCAAGAATGTCAATTGGGCTCTAGTTCGTTGCACGAAACCTCCTGAGCTTGACGCTCCTATCTTCCTGGAAAATGGTGAGAAGAAAGAAGCCAAAGACATTGACCCTGGCTTAGATGATTTACAGAAAAATATTTTCTGA	2937	0.43	MEHLKKSPSSSSSSSMRPSFPRDPRGSLEVFNPTSNSSSPVRSPSNLKNWTETKEEQRKEISELHTEFSDEITNTSWMAIKEGETGAAVQRAAEWGLVLTTDAETGKPQGVAVRHSGGDEPNVKLETKRNSNNSVRTSGESSDGGDPRGFPRVSEDLKDALSAFQQTFVVSDATKPDYPILYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPNDVARIREALEGGKSFCGRLLNYKKDGTPFWNLLTISPIKDDDGNVLKLIGMLVEVNKHTEGSKEKKLRPNGLPESLIRYDARQKEKATSSVDELLQAMKRPRALSESGHRPFIRKSGGGGGSEEDEEAERLDSKSRRKSDSVASFRPKPQGKVRHSMERISELPENKQKNSRRGSFMGFMRKSHSIDESIDNEVIVDVSSGSEEDERDDSFEFDDRKKLREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGKNCRFLQGPETDPATVRKIREAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDHKGEVQYFIGVQLDGSQHVEPLHNCIAEDTAKEGELLVKETAENVGEAVKELPDANQKPDDLWMNHSKVVRPKPHRKDDEAWRAILKVVENGEQVGLKHFRPIKPLGSGDTGSVHLVELEGTGHYFAMKAMDKGVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYYPGGELFLLLDQQPTKVLKEDSVRFYAAEVVIALEYLHCLGIIYRDLKPENVLIQSDGHVSLTDFDLSCLTSCKPQLILPATEEKKKRKKKNKGQQKNQEVPLFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPKSKPVSPHGKQLIYWLLHRDPKNRLGSLEGANEIKNHPFFKNVNWALVRCTKPPELDAPIFLENGEKKEAKDIDPGLDDLQKNIF	978

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g07241	978	MobiDBLite	consensus disorder prediction	314	389	-	-
	Vivi2g07241	978	Gene3D	Phosphorylase Kinase; domain 1	638	722	-	-
	Vivi2g07241	978	FunFam	Putative LOV domain-containing protein	167	323	-	-
	Vivi2g07241	978	CDD	PAS	453	553	IPR000014	-
	Vivi2g07241	978	SUPERFAMILY	Protein kinase-like (PK-like)	626	949	IPR011009	-
	Vivi2g07241	978	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	760	772	IPR008271	GO:0004672\|GO:0006468
	Vivi2g07241	978	Gene3D	Transferase(Phosphotransferase) domain 1	723	944	-	-
	Vivi2g07241	978	SMART	serkin_6	639	933	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi2g07241	978	SMART	pas_2	155	224	IPR000014	-
	Vivi2g07241	978	SMART	pas_2	440	509	IPR000014	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g07241	Vivi-Chr2	215982780	215989983	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g07241	1	978	AGC Kinase Gene Family	AT3G45780	67.613	0.0	1305

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC_RSK-2	Vivi2g07241		Pkinase	9.7e-63	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g07241	K20715		-	gmx:100817565	1490.71

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