Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07237 ATGAGTTGTTTTCGTTGTGTCGGAAAATCACGCCAAAAGAATCAGACAGACAATTCTAGCCGTAGAGAGAACTACACTAATATCACTTCAGCTGATAAGGTCAAAGTTGATGTGAATTTGAATTTGAGTGCGAATGATAAAAAGGAAGATGAATCTAAGCATGATCAGCTTTCCTTGGACGTGAAGAATTTGAATTTGAAAGACGGGGTTTCGCCCGATGGAAAAGTTGCAAAGACGTTTACTTTTCAAGAACTCGAAGCTGCAACAGGGAATTTTAGGGCAGATTGCTTTGTTGGTGAAGGAGGGTTTGGGAAGGTTTATAAGGGTAACATTGAGAGAATAAACCAGGTTGTTGCGATAAAGCAACTCGACCCGAATGGTCTTCAAGGGATTCGGGAGTTTGTTGTTGAAGTGTTGACGCTTAGTTTGGCAGACCATCCTAATCTTGTTAAGCTATTAGGGTTTTGTGCCGAGGGAGAGCAGAGGCTTTTGGTTTATGAGTACATGCCATTGGGATCTTTGGAGAATCATTTGCATGATCTTTCGCTTGGAAAAAAGCCGTTGGATTGGAATACCAGGATGAGAATAGCTGCCGGTGCAGCTCGAGGTTTGGAGTATTTGCACGATAAGATGAAGCCTCCTGTCATATACCGCGACCTCAAATGCTCCAACATTTTGTTAGGAGAAGATTATAATCCGAAGTTATCTGATTTCGGATTGGCGAAAGTAGGCCCGATTGGTGACAAGACTCATGTTTCAACTAGAGTTATGGGCACGTATGGGTACTGTGCTCCGGATTACGCAATGACGGGTCAATTGACGTTCAAGTCTGATATTTACAGCTTTGGGGTTGTTCTTTTGGAGCTCATCACAGGCAGAAAGGCTATCGACCATAGAAAACCTGCTAAAGAACAAAACCTAGTCGCATGGGCAAGGCCGTTATTCAGAGACCGACGGAGATTCTCAGAGATGGTAGATCCATTGCTTGAAGGTCATTATCCAGTGAGGGGTTTGTACCAAGCTCTTGCTATTGCAGCAATGTGTGTTCAAGAGCAACCTAATATGCGGCCGGTTGTAGCTGACGTGGTCACGGCTCTAAATTACCTTGCTTCGCAAAAGTATGATCCGCAAACTCAACCAATACAAAGACCGAGAAAAAGTTCATCTTCTACGAGAGGTAGTAGCGCAGGCCATAGACGTGTTACTAGTAATGATTCCGAGACAGACAGATTCGGAGATTAG 1242 0.4372 MSCFRCVGKSRQKNQTDNSSRRENYTNITSADKVKVDVNLNLSANDKKEDESKHDQLSLDVKNLNLKDGVSPDGKVAKTFTFQELEAATGNFRADCFVGEGGFGKVYKGNIERINQVVAIKQLDPNGLQGIREFVVEVLTLSLADHPNLVKLLGFCAEGEQRLLVYEYMPLGSLENHLHDLSLGKKPLDWNTRMRIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEDYNPKLSDFGLAKVGPIGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHRKPAKEQNLVAWARPLFRDRRRFSEMVDPLLEGHYPVRGLYQALAIAAMCVQEQPNMRPVVADVVTALNYLASQKYDPQTQPIQRPRKSSSSTRGSSAGHRRVTSNDSETDRFGD 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07237 413 FunFam probable serine/threonine-protein kinase RLCKVII 65 168 - -
Vivi2g07237 413 PANTHER OS07G0668900 PROTEIN 3 378 - -
Vivi2g07237 413 SUPERFAMILY Protein kinase-like (PK-like) 78 394 IPR011009 -
Vivi2g07237 413 Pfam Protein kinase domain 97 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07237 413 Gene3D Transferase(Phosphotransferase) domain 1 169 390 - -
Vivi2g07237 413 ProSitePatterns Protein kinases ATP-binding region signature. 98 121 IPR017441 GO:0005524
Vivi2g07237 413 Coils Coil 47 67 - -
Vivi2g07237 413 MobiDBLite consensus disorder prediction 374 413 - -
Vivi2g07237 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Vivi2g07237 413 ProSiteProfiles Protein kinase domain profile. 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07237 413 Gene3D Phosphorylase Kinase; domain 1 77 168 - -
Vivi2g07237 413 CDD STKc_IRAK 98 367 - -
Vivi2g07237 413 SMART serkin_6 92 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07237 413 MobiDBLite consensus disorder prediction 374 401 - -
Vivi2g07237 413 FunFam Serine/threonine-protein kinase PBS1 169 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07237 Vivi-Chr2 215891792 215894429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07237 1 380 Glycoside Hydrolase AT3G07070 54.731 8.22e-150 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Vivi2g07237 Pkinase 4.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07237 - - gmx:100794680 644.425