Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07224 ATGCAGAGATCAGGCTACGGTTCGGATGGAATATACCGTTCTCTAAGACCTTCCCTCAAATTACCAAAAAACCCGAACCTCTCTCTCGTCACACATCTTTTCAACAACGTCGCTTCTTCCCCAACCAAAACCGCTTTAATAGATGCCGACTCTAATCAATCACTAACCTTCGCTCAATTAAAATCTCTCACAATTAAACTCTCACACGCGTTAATCCACACCGGTGTAAAAAAAACCGATGTCGTTCTCTTCCTCGCTCCAAATAGTTATCTATACCCCGTTCTCTTCCTCGCCGTCACCTCCATCGGCGCCATCGCCTCCACCGTTAATCCTGCCTATACCACTGCTGAAGTCTCCAAACAAGCTAAGGATTCAAATCCGAAACTCATCATCACCGTCGCTGAGTTATGGGAGAAAGTACAACATCTCAACCTCCCCGCTGTTTTTCTTAACTCTGGGACATCGACATCGTATTCAAATGTCACGAGTTTTGAATCGTTCGTCAAACTCGGAGAATCCGGTGCAGATTTTCCGAAAATTGACGTGAAACAGAGTGATACAGCGGCGCTGTTGTATTCATCTGGAACCACTGGTTTGAGCAAAGGAGTGATTCTGACTCACGCGAATTTCATTGCTTCTGCGAAGATGATTACGATGGATGATGAACTGAACGGGGAAATAGACGATGTGTACCTTGTTGTTCTTCCGATGTTTCATGTTTTTGGACTTGCGGTTATTACTTGCTCGCAGCTTCAAAGAGGGAACACGGTGGTTTCATTGAAGAGGTTTGAGTTTGAGGTGGTGTTGAAGACGATTGAGAAGTTTAGGGTTACGAGGTTGTGGGTTGTGCCTCCTATTGTACTTGCTCTTGCTAAGCATAGTTTGGTTGATAAGTATGATCTTTCTTGTTTGAAGTATATTGGGTCTGGTGCTGCTCCTCTTGGGAAAGAGTTGATGCAGGAGTGCGCGAAGCGTTTCCCTCGCGCGATTGTTTCTCAGGGGTATGGTATGACTGAAACTACTGGGATTGTTTCTGTGGAGAATACAAGGATGGGGATTAGGCATACTGGTTCAACTGGAATGCTTGTTGCTGGTGTGGAAGCTCAAATTGTCAGTGTGGATACATTGAAGCCACTTCCTCCTGGACAGCTTGGGGAGATATGGGTACGGGGCCCGAATATGATGCGAGGTTATCATAACAATCCACAGGCAACTAGATTGACTATAGATCAAAAAGGGTGGGTACATACAGGAGATCTTGGATATTTTGACGAAGATGGCCATCTTTTTGTCGTTGATCGCATCAAAGAACTGATCAAGTATAAAGGTTTCCAGGTTGCACCAGCTGAACTTGAAGGGCTTCTTATTTCTCATCCTGAAATACTTGATGCAGTCGTCATTCCATATCCTGATGCCGAAGCTGGTGAGGTTCCAGTTGCCTATGTTGTGCGATCGCCCAATAGTTCATTGACCGAGGACGATATTAAAAAATTTATCGCTAATCAGGTAGCACCTTTCAAAAGATTGCGAAGGGTTACATTCATCAACGCTGTTCCAAAAACAGCATCAGGAAAAATTCTAAGAAGAGAGCTTATCGACAAAGCAAAATCCAAAATATAA 1620 0.442 MQRSGYGSDGIYRSLRPSLKLPKNPNLSLVTHLFNNVASSPTKTALIDADSNQSLTFAQLKSLTIKLSHALIHTGVKKTDVVLFLAPNSYLYPVLFLAVTSIGAIASTVNPAYTTAEVSKQAKDSNPKLIITVAELWEKVQHLNLPAVFLNSGTSTSYSNVTSFESFVKLGESGADFPKIDVKQSDTAALLYSSGTTGLSKGVILTHANFIASAKMITMDDELNGEIDDVYLVVLPMFHVFGLAVITCSQLQRGNTVVSLKRFEFEVVLKTIEKFRVTRLWVVPPIVLALAKHSLVDKYDLSCLKYIGSGAAPLGKELMQECAKRFPRAIVSQGYGMTETTGIVSVENTRMGIRHTGSTGMLVAGVEAQIVSVDTLKPLPPGQLGEIWVRGPNMMRGYHNNPQATRLTIDQKGWVHTGDLGYFDEDGHLFVVDRIKELIKYKGFQVAPAELEGLLISHPEILDAVVIPYPDAEAGEVPVAYVVRSPNSSLTEDDIKKFIANQVAPFKRLRRVTFINAVPKTASGKILRRELIDKAKSKI 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07224 539 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 534 - -
Vivi2g07224 539 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
Vivi2g07224 539 Gene3D - 9 436 IPR042099 -
Vivi2g07224 539 CDD 4CL 21 531 - -
Vivi2g07224 539 Gene3D - 437 538 IPR045851 -
Vivi2g07224 539 FunFam 4-coumarate--CoA ligase 2 437 538 - -
Vivi2g07224 539 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 436 - -
Vivi2g07224 539 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
Vivi2g07224 539 Pfam AMP-binding enzyme 35 441 IPR000873 -
Vivi2g07224 539 SUPERFAMILY Acetyl-CoA synthetase-like 24 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07224 Vivi-Chr2 215679245 215682500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07224 1 539 Monolignol Biosynthesis Gene Families AT4G05160 66.176 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07224 K01904 - gmx:100797843 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07224 2 215679245 215682500 Vivi2g07224 2 215679245 215682500 ECH