Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07223 ATGATTTTAGATAGAACTGGTTTCTGCATCAAGATATCTTCAAAAGCTGAGTCTCTTATTTGGCGTATCGAGATTGATGAGAATGTGGCAAGAGAGATTATCAACCACAGGTCTCTTCGGCACCCGAATATAATTCGCTTTAAGGAGGTGGTTTTGACTCCTACTCATTTAGCAATAGTGATGGAGTATGCAGCTGGAGGTGAACTCTTTGAGCAGATATGTAGTGCTGGACGGTTTAGCGAAGACGAGGTATTTTTTCAGCAGCTGATATCTGGTGTCCATTACTGTCATGCTATGCAAATATGTCATAGAGATTTGAAGCTGGAAAATACACTGTTAGATGGAAGCCCTGCACCTCGCTTGAAAATTTGTGACTTTGGTTATTCCAAGTCATCTTTGCTTCATTCCCGACCCAAATCAACTGTTGGAACTCCCGCTTATATAGCTCCGGAGTTGGCTGATGTGTGGTCGTGCGGCGTAACCCTTTATGTCATGCTGGTTGGAGCATATCCCTTTGATCAAGATGACCCGAGAAATTTTAGGAAAACAATTCAGGTATGTTATCCTTCCCTTACATATTTATTCAATGACTGA 594 0.4175 MILDRTGFCIKISSKAESLIWRIEIDENVAREIINHRSLRHPNIIRFKEVVLTPTHLAIVMEYAAGGELFEQICSAGRFSEDEVFFQQLISGVHYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPELADVWSCGVTLYVMLVGAYPFDQDDPRNFRKTIQVCYPSLTYLFND 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07223 197 SUPERFAMILY Protein kinase-like (PK-like) 7 192 IPR011009 -
Vivi2g07223 197 ProSiteProfiles Protein kinase domain profile. 1 197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07223 197 ProSitePatterns Serine/Threonine protein kinases active-site signature. 101 113 IPR008271 GO:0004672|GO:0006468
Vivi2g07223 197 Pfam Protein kinase domain 8 180 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07223 197 Gene3D Transferase(Phosphotransferase) domain 1 2 195 - -
Vivi2g07223 197 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07223 197 PANTHER SERINE/THREONINE KINASE 10 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07223 Vivi-Chr2 215645634 215649701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07223 5 190 CBL-interacting serine-threonine protein kinases AT5G01810 40.865 4.09e-42 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Vivi2g07223 Pkinase 6.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07223 K14498 - gmx:547968 311.612