Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07217 ATGGCCAAAAAGAAGAGTAGAGGTAGCATTGTGAAGCTCATTGAGAAGCTACAAAAGAGGCTATTACTAGTGAGAAACAAATCATCATCAACCTATGTGCCAGAGGATGTAAAAGAGGGACATTTTGCTGTTATAGCTGAAGGTATGAAAGAACAAGAATCAGAGAGATTTGTGCTTCCATTGAGTTGTTTAACAAATCCAATTTTTGTGAGGCTTTTGGAGCAAGCAGAAGAAGAGTATGGTTTTGATCATGAAGGTGCACTAACCATTCCTTGCAAGCCTAGTGAGCTTCACAAGATGCTACAACATGAGGATTCTTGTCATAATTCTATGGTTTTTCAAAACTATTGA 351 0.3789 MAKKKSRGSIVKLIEKLQKRLLLVRNKSSSTYVPEDVKEGHFAVIAEGMKEQESERFVLPLSCLTNPIFVRLLEQAEEEYGFDHEGALTIPCKPSELHKMLQHEDSCHNSMVFQNY 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07217 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 100 IPR003676 GO:0009733
Vivi2g07217 116 Pfam Auxin responsive protein 26 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07217 Vivi-Chr2 215582507 215583020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07217 9 92 Calmodulin-binding Proteins AT5G20810 42.222 2.81e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07217 K14488 - cam:101506786 175.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07217 2 215582507 215583020 Vivi2g07217 2 215582507 215583020 ECH