Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07203 ATGTATTCAAAACTCTTTCACTTTCCTATGTGCAAAACCAAAATGGCCATTAACGCTTCTACCCCTAAATCAACCCCACCTTCACATCAACAACAACAACGCACAAACCAAACACCAAGAACACCATCATCATCATCAAAAACACCATCAAAAGCATCATCGAAAACATCATCAAAAACATCATCAAACCCCACAAATCCCAAAACCCCTTCTTTCTCCGACAACCCATCCACCTCCTACGCCACCACAACCAACTCCACCGGTTTCCGTCTCTCAACCGACACATCCATCTCAAGCCCAACCTCCCTCACCACCTTCCGCAACACCCTCCCAGAAAACCCCAACATCTACGACTTCTCCGAAATCTGTTCCGCCACAAACAACTTCCTCTCCAAACGCTTCTCCTCCTCAACCCCATGCTGGCACTGCACCCTCCGCGGCGCTGACGTCATCATCTTCCAACGCAAATTCCGCCGCAAACTCCAAACCACCCAACTCCGGGAGCTTCTCTCTGTCGTCTGCCGTAGCCACCACATCAGCATCATCAAACTCCTCGGCGTCTCAATCTCCGGGGAACATATCTACCTCGTGTACGAATTCGTTAACGGCGCTAACCTCTCCGATTGTTTACGTAACCCTCGTAACGTTCATTTCACCGTTCTTTCTACATGGATTTCGAGAATGCAAGTCGCCACCGATCTCGCTCATGGACTCGATTACATTCACAACAAGACCGGTTTGAATTTCAACTTCGTTCATAACCATATCAAGAGTAGCGCGATCGTTGTTACTGAATCTGATTTCAATGCTAGGGTTTGTCACTTCGGCGCGGCTCAGCTCTGCGGTGAAGCCGTTGCGGAAAACGAAACCGCCACCAAACAATTGGGGGAAAACGAAATCACGGAGGAAGTTAGATCCAAGGAGTTGAGAAGCTCCAACGTTGAATTCGAAGGTGTGAGAGGTTACATGTCGCCGGAGTTTCAAACCACCGGCGTGGCGACGCAGAAGTCTGACGTGTATGCTTTTGGAGTGGTGATACTGGAGCTTTTATCCGGGGAGGAGCCGTTGAAGTTTAGGTTTGACGAGAAGAGCCGTGATTTTGTGAGGAAATCGGTGATTGAGTCAGCGAGAGCCGCCGTGGACGGTGGCGATGGTGGCGTGGAAGGGAAGCTGAGGATGTGGGTGGATAGGAGGTTGAAAGATTCGTTTCCAGTTGATGTTGCTGAGAAGCTGACACGTGTAGCGTTGGATTGTGTACACGTGGATCCGGATCAAAGGCCTAACATGGGACGCGTGGCAGGGAAGATTTCCACGTTGTATTTGAAGTCTAAGAATTGGTCTGATAACATGAAATTGCCTGATATGTCTTTTTCTTTGGGTCCTAGATGA 1389 0.491 MYSKLFHFPMCKTKMAINASTPKSTPPSHQQQQRTNQTPRTPSSSSKTPSKASSKTSSKTSSNPTNPKTPSFSDNPSTSYATTTNSTGFRLSTDTSISSPTSLTTFRNTLPENPNIYDFSEICSATNNFLSKRFSSSTPCWHCTLRGADVIIFQRKFRRKLQTTQLRELLSVVCRSHHISIIKLLGVSISGEHIYLVYEFVNGANLSDCLRNPRNVHFTVLSTWISRMQVATDLAHGLDYIHNKTGLNFNFVHNHIKSSAIVVTESDFNARVCHFGAAQLCGEAVAENETATKQLGENEITEEVRSKELRSSNVEFEGVRGYMSPEFQTTGVATQKSDVYAFGVVILELLSGEEPLKFRFDEKSRDFVRKSVIESARAAVDGGDGGVEGKLRMWVDRRLKDSFPVDVAEKLTRVALDCVHVDPDQRPNMGRVAGKISTLYLKSKNWSDNMKLPDMSFSLGPR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07203 462 Pfam Protein kinase domain 158 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07203 462 PANTHER OS09G0572100 PROTEIN 10 462 - -
Vivi2g07203 462 Gene3D Transferase(Phosphotransferase) domain 1 202 454 - -
Vivi2g07203 462 ProSiteProfiles Protein kinase domain profile. 91 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07203 462 Gene3D Phosphorylase Kinase; domain 1 91 200 - -
Vivi2g07203 462 MobiDBLite consensus disorder prediction 17 99 - -
Vivi2g07203 462 SUPERFAMILY Protein kinase-like (PK-like) 158 436 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07203 Vivi-Chr2 215270433 215273051 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07203 112 446 Receptor kinase-like Gene Family AT1G51940 30.904 8.02e-41 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi2g07203 Pkinase 5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07203 - - vvo:131653853 873.233