Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07201 ATGAATCCCAATCAACATATTACTTGGTCCAATTTTATGCAAAATGATGGAAGTCCTCCTAGTATCCCAAATCAACAAAACAATCCATATTTTGGAAATCTACCTCTTATTCCAAATCCACACCATAATCCAAATTTTCAAAACTCTCTTTTTATCCCAAATCCACAAAATAATTCATCCATTAGAAATTACTCCTATCATACACCACCTTATCCATATCAATATCAACAGTTTTCATCTCAATCAACTAACCCCAATATGTCTCATGTTGTTAAAATAGGTAGTAGTGGTGTGCAATCAAATGATCAAGAACATGAAACACCACAACTTTGCACTCAAGATAGCTTGGAAAATACTACCCTTGGTGAAGATGTTGCATCTGCACCGGTTGTGAATGCGCCTAAACAAAGATTCCAACCGAAAGAAGATGAAATTCTCATTCAAACATGGCTCAACGTTTCAAAGGATTCAATTGTTGGAGTTAATCAAAAAGGAGATAGTTTCTGGAAGAGAATTGGTGAAGCATTTAACAAGCATCGTGACATGAATTACAAAGAGAGGAAACTGATGGCACTAAAAGGTAGATGGCACAAAATTAATCCATCTGTTCAAAAGTTTGTTGGATGCTACAAACAAGCATTTTCTACACAAAAAAGTGGGAGCTCCGAAAACAATATCATGCAGGTTGCGTATAGAGTTTATTTTCAAGATGAAGGTGAAAAGTTTAAATTTGAGTCTGCTTGGAGATTATTGAAAGATGAACCTAAATGGCTCGCAGGTTCATCAGAAGCTTTTGCAAAAAGAACAAAGAATTCAGCATCTAGAGCATATTCTTCGTCTTCTAACCCACCGACACCAACGAGCAGCGAATACAATCCACCATCACCTACTCTGTTACGTCGTCCAATCGGTCAAAAGGCAGCCAAAAGGAAGGAGAAAGAAAAGATGGTGGAAATGTCTACTCCCAATGTTAAATATGATAAATTCAAATATGAATTCAAAAAGAAAACTGATTTGATGTCAGTGTTTGCACAAGACTATGCACGTATTGAGAGTGAAAAACTCGAGATTGAAAGAAAAAAGGTTGAAGCAAAGATTAAGAAGGCCGAGATGAAAGAGGAAAGATTGAAGATCGATGATCTACAAATTCTCTCAAAGGATACTTCAAATATGAATTCAAGACAACTACAAGCTCATGATTTATTGTGCGACGTGATTCGGAAAAAATATGGCCTTAATTAA 1242 0.3599 MNPNQHITWSNFMQNDGSPPSIPNQQNNPYFGNLPLIPNPHHNPNFQNSLFIPNPQNNSSIRNYSYHTPPYPYQYQQFSSQSTNPNMSHVVKIGSSGVQSNDQEHETPQLCTQDSLENTTLGEDVASAPVVNAPKQRFQPKEDEILIQTWLNVSKDSIVGVNQKGDSFWKRIGEAFNKHRDMNYKERKLMALKGRWHKINPSVQKFVGCYKQAFSTQKSGSSENNIMQVAYRVYFQDEGEKFKFESAWRLLKDEPKWLAGSSEAFAKRTKNSASRAYSSSSNPPTPTSSEYNPPSPTLLRRPIGQKAAKRKEKEKMVEMSTPNVKYDKFKYEFKKKTDLMSVFAQDYARIESEKLEIERKKVEAKIKKAEMKEERLKIDDLQILSKDTSNMNSRQLQAHDLLCDVIRKKYGLN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07201 413 Coils Coil 347 379 - -
Vivi2g07201 413 Pfam No apical meristem-associated C-terminal domain 241 395 IPR029466 -
Vivi2g07201 413 MobiDBLite consensus disorder prediction 269 316 - -
Vivi2g07201 413 MobiDBLite consensus disorder prediction 269 286 - -
Vivi2g07201 413 PANTHER - 131 409 - -
Vivi2g07201 413 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07201 Vivi-Chr2 215222192 215223433 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07201 133 313 Glutathione S-transferase Gene Family AT5G41240 39.896 8.45e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07201 - - vvo:131642220 703.36