Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07188 ATGAAGCATCAACTCAAAGTTTCTTTTGCTCTTATTATTAGCTTTCTATGGTTTCAGCAATCATTTTCAAATGAACCTTCTGATACTGGTCTAAACAAGTGGGAATGTAGATGTTCTTTCCGAGGGAATCAAAGATACTCTATTGCAAATTGTTCCAAGTCATGTGATTGTCATTCAGAGAGTGCTTCCATATGGACATGTATTTGTGATTCAAATGGGTTTCCGGAAGTGGCAACAGATATCGATAATCCTAACTGCTTTATTGCCTGCAACTGCATCTGGGGAACTGCTAAGATGTCATTAGGTTCAAAGTCACATATTTCAAGCAAAATTGTAATCATCATTCTAGTGATGTCTATTACGAGCACAACTATTGCATTTCTTGCCTTATTTTTATGTTATGCTCGTCGAAGGAAGAGGCCTCATCCTATTCAATCACCAATGAACTCATCATCAGATAAGGAAACAAGTTATAATAATACTAGCAACTTCATTAGTCGCAAAACTTCTTTTGTGCGAGAAACAAAAGGCGTTATGAATTCTCCTATTAGTCATATTACAAGATGCTTTCGAAAAGCTTCTGTTTTGCTTGGGAGTCAGAGAGAAACATTTCATGGAAATATTATTCAATTCTCATTTGCTGAACTGGAAAATGCCACTGAAAACTTTTCAGCTTCCAATCTTATTGGATTAGGTGGAAGTAGTTATGTATACCGTGGTCGACTGAAAAACGGTAGTAATGTGGCAGTCAAGCGGCTTAAAGTTCAAGGAGGACCTGAAGCAGATACTGAGTTTTTCACCGAGATTGAACTATTGTCTAGACTTCATCATTGTCATCTGGTGCCATTGATTGGATACTGCTCAGAATTAAAAGGAAAAAATGTTCAGAGATTACTAGTGTTTGACTACATGAGTAATGGAAATTTGAGGGACCGTTTAGATGGAATTTTTGGAAAAAATATGGATTGGTCTACTCGCGTTACAATTGCCTTAGGAGCTGCAAGGGGCTTGGAGTATCTTCATGAGGCAGCTGCTCCAAGAATTCTCCACAGAGATGTCAAATCAACAAACATTCTTCTCGATAAAAATTGGCAAGCAAAAATAACTGATCTTGGTCTGGCTAAAGATTTGAGATCTGATGACCTCCGTAGTTGTTCAGATTCTTCCGAAAGAATGAAAGGGACATTTGGCTATTTTGCACCTGAGTATGCAATTGTTGGGAGAGCCTCTATTGAGTCTGATGTCTTCAGTTTTGGCGTGGTTCTTCTTGAGCTTATCACTGGTCGCCAACCTATCCTTAGATCTGCAGGCAAAGAAGAAAGCCTTGTTGTATGGGCTACTCCTCTCTTACGGGATAGTAGGCGAGTAATGACAGAGTTGGCTGATCCACAATTGAAAGGAAACTTCCCAGAAGATGAAGTGCATATAATGGCAAACCTAGCAAAGGAATGCTTACTGTTGGATCCTGATAATAGACCAACTATGAGTGAAGTTGTTCTAATTCTATCAAGTATTTCCCGAACCAGATCTAGAAGAAGAAGATACATTCAATTGTGCCTTTTTCAGGAACCAGAGGAAGAAGAGAAGCCAAGACAAGCTTCATGGAGAAGATTTCCACATCATAATTCATTGCCACGTGGTACTGACTACAATCTTCGTGTTGAAAACGAAGATAAAAATGTAGATACAATTTCAACCGAGTATATGAAGAGTTTGATCCTCTTGACTTCAAAAGGTGAGAGTTGGCATGCATCAGAAGAAGACATGGTAGACCTATCGGAGCCTCGGTTGGAATCATTTTCCATGACAAACATCAATTTCCCTTGA 1827 0.3886 MKHQLKVSFALIISFLWFQQSFSNEPSDTGLNKWECRCSFRGNQRYSIANCSKSCDCHSESASIWTCICDSNGFPEVATDIDNPNCFIACNCIWGTAKMSLGSKSHISSKIVIIILVMSITSTTIAFLALFLCYARRRKRPHPIQSPMNSSSDKETSYNNTSNFISRKTSFVRETKGVMNSPISHITRCFRKASVLLGSQRETFHGNIIQFSFAELENATENFSASNLIGLGGSSYVYRGRLKNGSNVAVKRLKVQGGPEADTEFFTEIELLSRLHHCHLVPLIGYCSELKGKNVQRLLVFDYMSNGNLRDRLDGIFGKNMDWSTRVTIALGAARGLEYLHEAAAPRILHRDVKSTNILLDKNWQAKITDLGLAKDLRSDDLRSCSDSSERMKGTFGYFAPEYAIVGRASIESDVFSFGVVLLELITGRQPILRSAGKEESLVVWATPLLRDSRRVMTELADPQLKGNFPEDEVHIMANLAKECLLLDPDNRPTMSEVVLILSSISRTRSRRRRYIQLCLFQEPEEEEKPRQASWRRFPHHNSLPRGTDYNLRVENEDKNVDTISTEYMKSLILLTSKGESWHASEEDMVDLSEPRLESFSMTNINFP 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07188 608 Gene3D Transferase(Phosphotransferase) domain 1 304 520 - -
Vivi2g07188 608 Pfam Protein kinase domain 225 499 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07188 608 CDD STKc_IRAK 229 502 - -
Vivi2g07188 608 ProSiteProfiles Protein kinase domain profile. 223 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07188 608 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Vivi2g07188 608 FunFam receptor-like serine/threonine-protein kinase NCRK 304 514 - -
Vivi2g07188 608 Gene3D Phosphorylase Kinase; domain 1 194 303 - -
Vivi2g07188 608 PANTHER OS01G0750732 PROTEIN 34 521 - -
Vivi2g07188 608 SUPERFAMILY Protein kinase-like (PK-like) 204 502 IPR011009 -
Vivi2g07188 608 ProSitePatterns Protein kinases ATP-binding region signature. 229 251 IPR017441 GO:0005524
Vivi2g07188 608 FunFam receptor-like serine/threonine-protein kinase NCRK 197 303 - -
Vivi2g07188 608 SMART serkin_6 223 505 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07188 Vivi-Chr2 215064980 215070478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07188 1 605 Receptor kinase-like Gene Family AT2G28250 48.112 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Vivi2g07188 Pkinase 1.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07188 - - gmx:100499641 864.374