Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07141 ATGGCGGATTATAGGAGTTTTTCATTTACTAAAATGATTGGCTGCTGGAGTTGTTTCGGGTTGATAAAGAAACATCCGAGACGGAGGCGTACGAGGCGGAGCATAAAGAATTATCTATCCCAGGGGCTGTTGACGGATGGAGAAACGGAGTGTGACGAGGTTTCACATAGTGGTGATTATACTAGTAACAATACTAGTGGAGATGATAGTGAGGTGCAAAATTTACCCAATCGTTCGGAGGATATTTTGAACTTTAGAGCAGAGAATGGCATGATTTGTAGGCCTTTTCCTGCTAAGGAGACTGACAAGCTTGTGCGATCTGAGGATGAAGACGGGAACAAGATGTTAAACGAATATATTCGAGAGTATAAGATTGGTTCTGGCAGCTATGCCAAAGTGGCTCTTTACCAAAGTAGTGTTGATGGACGACATTATGCAATTAAGTCCTTTCATAAGTCTCACTTACGAAAGCTTCGAGTTGCCCCATCTGAGACTGCCATGACGGATGTACTACGTGAGGTACTTATCATGAAAATGTTGGAACATCCTAATATCGTTAATCTCATCGAGGTGATTGATGACCCAGAGTCAGATGACTTCTACATGGTACTCGAATATGTGGAAGGAAAATGGGTTTGTGAGGGTTCAGGTCGTCAATGTGCCATCGGGGAAGAGACCGCCAGGAAATACATGCGTGATATAGTCTCGGGGTTAACATATCTTCATGCTCATAACATAGTGCATGGGGATATAAAACCTGATAATCTGTTGATTACCCGCAACGGGACTGTAAAGATTGGGGATTTCAGTGTCAGTCAGGCTTTTGAGGACGGTAATGATGAACTACGGCGATCTCCTGGCACTCCTGTTTTCACTGCACCAGAATGTTGTTTAGGTCTTACTTATCATGGCAAAGCTTCGGACACGTGGGCAGTAGGAGTAACTTTGTACTGTATGATATTGGGTGAATACCCATTTCTCGGAGACACACTTCAAGATACATACGACAGAATAGTCAATAATCCCATAGAAATCCCAGATGACATAAACCCGCAGTTAAAGAACTTAATAGAAGGATTGCTTTGCAAAGACCCTGAACAAAGGATGACATTGGCTGAAGTTGCTGAGCATGATTGGGTTATTGGAAATGACGGGCCAATCGGTAAGTACTCGTGTTGGTGCAAACGCAAGAGTCTGGTGATTGAAGACTTTGAGGAGAGCAATGTGGTTGCTTGA 1236 0.4328 MADYRSFSFTKMIGCWSCFGLIKKHPRRRRTRRSIKNYLSQGLLTDGETECDEVSHSGDYTSNNTSGDDSEVQNLPNRSEDILNFRAENGMICRPFPAKETDKLVRSEDEDGNKMLNEYIREYKIGSGSYAKVALYQSSVDGRHYAIKSFHKSHLRKLRVAPSETAMTDVLREVLIMKMLEHPNIVNLIEVIDDPESDDFYMVLEYVEGKWVCEGSGRQCAIGEETARKYMRDIVSGLTYLHAHNIVHGDIKPDNLLITRNGTVKIGDFSVSQAFEDGNDELRRSPGTPVFTAPECCLGLTYHGKASDTWAVGVTLYCMILGEYPFLGDTLQDTYDRIVNNPIEIPDDINPQLKNLIEGLLCKDPEQRMTLAEVAEHDWVIGNDGPIGKYSCWCKRKSLVIEDFEESNVVA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07141 411 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Vivi2g07141 411 MobiDBLite consensus disorder prediction 56 73 - -
Vivi2g07141 411 SUPERFAMILY Protein kinase-like (PK-like) 115 386 IPR011009 -
Vivi2g07141 411 ProSiteProfiles Protein kinase domain profile. 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07141 411 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 70 382 - -
Vivi2g07141 411 Gene3D Transferase(Phosphotransferase) domain 1 217 387 - -
Vivi2g07141 411 Pfam Protein kinase domain 121 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07141 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Vivi2g07141 411 FunFam Serine/threonine-protein kinase GRIK2 109 411 - -
Vivi2g07141 411 SMART serkin_6 119 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07141 411 CDD STKc_LKB1_CaMKK 125 380 - -
Vivi2g07141 411 FunFam Serine/threonine-protein kinase Ssp1 113 215 - -
Vivi2g07141 411 Gene3D Phosphorylase Kinase; domain 1 113 216 - -
Vivi2g07141 411 MobiDBLite consensus disorder prediction 49 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07141 Vivi-Chr2 214196565 214200189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07141 109 386 CBL-interacting serine-threonine protein kinases AT5G10930 32.155 3.75e-44 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Vivi2g07141 Pkinase 1.1e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07141 K00908 - gmx:100776013 706.057