Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07132 ATGACCGTCATCGACATTCTCTTCCGTGTCGACGCCGTCTGCAAAAAATACGACAAATACGACATTGACAAACAGCGTGAACTCAACGCTTACGGTGATGACGCCTTCGCCCGTCTCTACGCCGCCGTCGATTCCACCATTCAACAGGCCCTCATTAAATCTGAGGCTGCTACCAAGGAGAATAATAGAGCAGCTGCTGCGGCTATGAATGCTGAGGTTCGTAGAGCCAAGGGGAGATTGATGGATGAAGTTCCTAAACTCCGAAAACTCGTTAATAAGAAGGTTAAGGGTCTAACAAAGGAAGACATAGCCATTCGACAAGATCTTGTTGACGTATTGCCAGAAAGAATCCAAGCAATACCGGATGGTATTACATCTGCTGCTAATCAGACAGGAGGATGGGCGGCTACTTCGTCTCATCCGCATATCAAGTTCGATACACCAGAGGGACATATTGGCAGTGATTATTTCAATCCAAGTGAAGAATCCAGTCAGTTTCGATCAGAATATGAATTGCGCAAGATGAAACAGGATGAAGGGCTTGATATCATATCAGAAGGATTGGATACTTTGAAAAATCTAGCACATGATATGAATGAGGAATTAGATCGACAAGTTCCTTTAATGGATGAAATCGACACAAAGGTGGATAAAGCAACAAGTGATGTGAGAAACACTAACTTACGGCTGAAGAAAACTCTCACCGAGTTGAGGTCCAGTCGAAATTTCTGCATCGACATCACTCTAATGTGCGTTCTTCTTGGAATCGTTATGTATTTATACAATGCACTGAGGTAA 798 0.4348 MTVIDILFRVDAVCKKYDKYDIDKQRELNAYGDDAFARLYAAVDSTIQQALIKSEAATKENNRAAAAAMNAEVRRAKGRLMDEVPKLRKLVNKKVKGLTKEDIAIRQDLVDVLPERIQAIPDGITSAANQTGGWAATSSHPHIKFDTPEGHIGSDYFNPSEESSQFRSEYELRKMKQDEGLDIISEGLDTLKNLAHDMNEELDRQVPLMDEIDTKVDKATSDVRNTNLRLKKTLTELRSSRNFCIDITLMCVLLGIVMYLYNALR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07132 265 ProSitePatterns Syntaxin / epimorphin family signature. 177 216 IPR006012 GO:0005484|GO:0006886|GO:0016020
Vivi2g07132 265 FunFam Putative syntaxin-71-like 171 232 - -
Vivi2g07132 265 CDD SNARE_Qc 176 232 - -
Vivi2g07132 265 SMART tSNARE_6 166 233 IPR000727 -
Vivi2g07132 265 Pfam SNARE domain 208 257 IPR000727 -
Vivi2g07132 265 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 171 233 IPR000727 -
Vivi2g07132 265 SUPERFAMILY SNARE fusion complex 164 232 - -
Vivi2g07132 265 Gene3D - 172 232 - -
Vivi2g07132 265 PANTHER SYNTAXIN 58 256 IPR045242 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07132 Vivi-Chr2 214068488 214070800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07132 1 265 SNARE and Associated Proteins AT3G09740 66.292 5.25e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07132 K08506 - gmx:100817729 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07132 2 214068488 214070800 Vivi2g07132 2 214068488 214070800 ECH