Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07115 ATGGCAGTTACTTTCTCATATCTACACACAGAAGAGGGTCTCAAATCCCTCAACGATTTTCTCTCCGGAAAAACCTATATCTCCGGGGATCAATTGACAAAGGATGATATCAAGGTTTATGGAGCTGTTTCTGAGAAGCCAAGTGGGTCTTTTTCCAATGCTGCTACTTGGTATGATGCTGTTTCTTCAAGCCTTGCTGCTAGTTTCCCTGGAAAAGCTCAAGGTGTGAAGTTTGCAGCAAGTGGTGCTGCTCCAGCTGCTGAAGCACCTGCCAAAGCAAAAACAATTGCTTCTCCAAGGCGTGGTATTTTGGCCATGGATGAATTCAATGCTACATGTGGAAAGCGGTTGGATTCAATTGAACTAGAGAACACCGAAACTAACCGTCAAGCATGGCGTAAAATTATATATGAAGAAAGTGTTATGACTTAG 432 0.4306 MAVTFSYLHTEEGLKSLNDFLSGKTYISGDQLTKDDIKVYGAVSEKPSGSFSNAATWYDAVSSSLAASFPGKAQGVKFAASGAAPAAEAPAKAKTIASPRRGILAMDEFNATCGKRLDSIELENTETNRQAWRKIIYEESVMT 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07115 143 Pfam Fructose-bisphosphate aldolase class-I 91 138 IPR000741 GO:0004332|GO:0006096
Vivi2g07115 143 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 87 137 IPR000741 GO:0004332|GO:0006096
Vivi2g07115 143 SUPERFAMILY Aldolase 86 138 - -
Vivi2g07115 143 Gene3D Aldolase class I 73 143 IPR013785 -
Vivi2g07115 143 SUPERFAMILY GST C-terminal domain-like 10 65 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07115 Vivi-Chr2 213636510 213638003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07115 1 89 Eukaryotic Initiation Factors Gene Family AT5G12110 64.045 2.69e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07115 K03232 - vvo:131597742 160.999