Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07104 ATGGAACGCTTCATTGATAACTTGCCGCCGATGGATCTGATGCGATCGGAGAAGATGACGTTTGTTCAACTCATCATCCCCGCCGAGTCCGCTCAGCGTGCCGTTTCGTATTTAGGCGAACTCGGTCTTCTTCAATTCAGAGACTTAAATGCTGACAAAAGCCCTTTCCAGAGAACGTTTGTTAATCAGGTAAAACGATGTGCAGAAATGTCAAGAAAGCTACGATTTTTCAAGGATCAAATCAATAAAGCTGGTCTTATATCGCCTTCTCGTACTCTATTGCAACCGGACATAGACTTGGAGGATTTAGAGGCACATCTTGCTGAGCATGAACATGAGCTAATTGAAATGAACTCTAATAGTGACAAGCTTCGGCAGTCATATAACGAACTTCTGGAATTCAAGATTGTATTACAGAAGGCATGCAGTTTTCTTATTTCTAGCCATGGTCGTGCTATTTCAGACGAGGTAGAGCTACAAGATAGTATATACTCAAATGATAACTATGTTGAGACATCATCTTTGCTTGATCAGGAAATGAGACCCGAACCATCAAATACGTCTGGTTTAAGATTTATCAGCGGGATAATTTGTAAATCCAAGGCTCTTAGGTTTGAAAGGATGTTATTTCGTGCTACAAGAGGCAATATGCTTTTCAATCAGGCACCAGCTGGTGAACAAATCATGGATCCTGTTACAACTGAGATGATTGAGAAAACAGTATTCGTTGTGTTTTTCTCTGGGGAACAGGCAAGAACAAAGATTCTGAAAATTTGCGAGGCATTTGGTGCAAATTGTTATCCTGTTCCTGAAGATATAAGCAAGCATGGGCAAATAACCAGGGAGGTTACATCACGCCTTACTGACTTAGAGGCAACTTTGGATGCTGGGATTAGGCACCGGAACAAGGCGCTAGCTTCTATAGCAGACCATCTAGCAAAATGGATGGACCTGGTAAGAAGAGAGAAGGCCGTGTATGATACACTGAACATGTTAAATTTTGATGTCACAAAAAAATGTCTTGTTGGAGAGGGATGGTGCCCTATGATTGCAAAAACACAGATGCAAGAGGCACTGCAACGTGCAACTTTTGATAGCAATTCTCAAGTTGGCATAATCTTCCATCAAATGGATGCAGTGGAATCACCACCTACATATTTTAAGACCAACAGTTTCACAAATCCTTATCAAGAAATTGTTGATGCATATGGTGTCGCAAGATACCAAGAAGCAAATCCCGCAGTTTACACAACTGTTGTATTCCCCTTCCTATTTGCTATGATGTTTGGGGACTGGGGTCATGGAATTTGCCTGTTGCTGGGAGCATTAGTTCTTATATCACGTGAAAACAAGCTCAGTACTCAGAAGCTTGGAAGCTTCATGGAGATGCTATTTGGTGGGCGCTATGTGATTCTCTTGATGTCACTATTTTCAATCTATTGTGGGTTAATCTACAATGAGTTCTTTTCTGTTCCTTTTCACATATTTGGTCCATCAGCATTTCAATGCCGGGATACTTCATGCAGGGATGCACATACTATTGGCTTAGTCAAATACCGTGATCCATACCCATTTGGTGTGGATCCTAGCTGGCGTGGAAGTCGTACAGAATTATCTTTTCTGAACTCTATGAAGATGAAGATGTCCATTCTGTTTGGTGTGGCACATATGAACTTGGGAATTATATTAAGCTATTTCAATGCTCGTTTCTTTGGAAGCTCATTGGATATAAGGTACCAATTTGTGCCACAGATGATTTTCCTTAACAGTCTCTTTGGATATCTTTCCCTTCTCATTATTGTTAAGTGGTGTACTGGCTCTCAAGCAGACCTTTATCATGTGATGATATATATGTTTTTAAGCCCTACAGATGAACTTGGTGAAAATCAGTTGTTCTGGGGCCAAAGACCACTTCAAATTGTGTTATTGCTTCTGGCTATAATTGCAGTTCCATGGATGCTCTTTCCCAAACCTTTTATTCTAAAGAAGCTTCATACTGAGCGATTTCAAGGCCGTAGTTATGGTATTTTGAATACTTCTGAAATGGATCTTGAGGTGGAGCCAGATTCTGCCAGGGAACATCATCATGAAGAGTTCAATTTCAGTGAGGTTTTTGTTCACCAAATGATTCATTCCATCGAGTTTGTTTTAGGTTCAGTTTCTAATACGGCATCATATCTTCGACTGTGGGCATTAAGTTTGGCTCACTCCGAACTTTCTACCGTTTTCTATGAGAAAGTGTTGCTTCTTGCTTGGGGGTACGACAATCTCATCATTCGGTTAGTGGGGCTAACAGTTTTTGCATTTGCAACTGCCTTTATACTACTTATGATGGAGAGTCTAAGTGCTTTTCTTCATGCCCTGCGGCTTCACTGGGTAGAATTTCAAAATAAATTCTACCATGGTGATGGCTACAAGTTCAAGCCTTTTTCATTTGCTTCTTTAACAGAGGATGATGATTGA 2463 0.4064 MERFIDNLPPMDLMRSEKMTFVQLIIPAESAQRAVSYLGELGLLQFRDLNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQINKAGLISPSRTLLQPDIDLEDLEAHLAEHEHELIEMNSNSDKLRQSYNELLEFKIVLQKACSFLISSHGRAISDEVELQDSIYSNDNYVETSSLLDQEMRPEPSNTSGLRFISGIICKSKALRFERMLFRATRGNMLFNQAPAGEQIMDPVTTEMIEKTVFVVFFSGEQARTKILKICEAFGANCYPVPEDISKHGQITREVTSRLTDLEATLDAGIRHRNKALASIADHLAKWMDLVRREKAVYDTLNMLNFDVTKKCLVGEGWCPMIAKTQMQEALQRATFDSNSQVGIIFHQMDAVESPPTYFKTNSFTNPYQEIVDAYGVARYQEANPAVYTTVVFPFLFAMMFGDWGHGICLLLGALVLISRENKLSTQKLGSFMEMLFGGRYVILLMSLFSIYCGLIYNEFFSVPFHIFGPSAFQCRDTSCRDAHTIGLVKYRDPYPFGVDPSWRGSRTELSFLNSMKMKMSILFGVAHMNLGIILSYFNARFFGSSLDIRYQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDELGENQLFWGQRPLQIVLLLLAIIAVPWMLFPKPFILKKLHTERFQGRSYGILNTSEMDLEVEPDSAREHHHEEFNFSEVFVHQMIHSIEFVLGSVSNTASYLRLWALSLAHSELSTVFYEKVLLLAWGYDNLIIRLVGLTVFAFATAFILLMMESLSAFLHALRLHWVEFQNKFYHGDGYKFKPFSFASLTEDDD 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07104 820 PANTHER VACUOLAR PROTON ATPASES 13 819 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vivi2g07104 820 Pfam V-type ATPase 116kDa subunit family 37 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vivi2g07104 820 Coils Coil 100 127 - -
Vivi2g07104 820 PIRSF ATP6V0A1 9 820 IPR026028 GO:0000220|GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07104 Vivi-Chr2 213411603 213422011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07104 1 813 Primary Pumps ATPases(2) AT2G28520 80.491 0.0 1363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07104 K02154 - gmx:100776037 1496.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07104 2 213411603 213422011 Vivi2g07104 2 213411603 213422011 ECH