Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi2g07094 | ATGTTAGATCTTAATCTGAATGCTGAGTTGACTCAGAACGATGACTCGGTCATGCTACTGGAAAAAGTTCCACAAGCTTCTTCAGGAACTTCGAATTCGTCAATCGTGAATGCGGAGGGGTCGAGTAACATCACCGGAGATGACGACTCGTGTTCAACACGCGCCGGTGGTGTTTTCACCTTCCAATTCGGTATACTTAAGGTGGAAAAAGGAACCGACGCTGTTGCGACGAAAGAGCTGTTTCCGGTGAGTGCGGGGAACTGGCCGCACGGGGAGAGTTCGGCGATGCTGATTCCGGCGAGGAAGAGCGTGATGGATCTTTCACTTGATCAACGTATTGGAGGTGAAAATGGAGTTGCTCAGGTTCCGCAACGGCCGCAGGTGAAGAAGAGTCGGAGAGGACCGAGGTCACGAAGCTCTCAGTACAGAGGAGTCACGTTCTACAGAAGAACTGGAAGATGGGAATCGCATATCTGGGATTGTGGGAAGCAAGTTTATTTGGGTGGATTTGACACTGCTCATGCTGCTGCTAGAGCTTATGATCGAGCTGCTATAAAGTTCAGAGGACTTGATGCTGACATTAATTTCAATCTAGTTGAGTATGAAGAAGATATGAATCAGATGAAGAATCTCTCAAAGGAGGAATTTGTGCACATACTACGTCGCCACAGTAATGGTTTCTCAAGGGGGAGTTCAAAATACAGAGGAGTAACACTTCACAAATGTGGTCGTTGGGAAGCTCGAATGGGACAACTCCTTGGAAAAAAGTATGTATATCTTGGGCTATTCGACAGCGAAGTAGAAGCTGCAAGGGCTTATGACAAGGCAGCTATCAAGTGTAATGGAAGAGAGGCTATGACAAACTTTGAGCCAAGTACATATGGAAGTGAGATCAAACCTGAAGCTATCAATGAAGGTGGCAGTCACAATCTTGACCTCAATTTAGGCATGGCAACTCCAGGGCATGAACCCAAAGAAAACAGAGGGTATCGTCAGTTTCAGACCACCCCTTACAACCTGTATCCTGGAAGGAATTTGAAGATGGAGACTAATGCTAATTCAGTTCTTAGTGACCTGTCTTTGAAAAAGCTAGTTGCAACTGAACAGCGTCCTTCCATGTGGAATGCCACGTATTCTAGTTTCTTTCCCAATGAGGAAAGAGCAGAGAGAATCGGCATTGATCCTTCAAAAGGACCTCCCTACTGGGCATGGCAAGCACATAGTCAGGGCACTGCTTCCCCAGTACCACAATTCTCTACTGCAGCATCATCAGGATTCTCTATTTCAGCTACCTTTCCGCCAAATTCCATCTTTCAAACACAACCTATGAACTCAATTCCACTCCGTTTCACTCCATCCATCGCACCTGGTAGCAATGCATCTCAATACTATTATCAGGTGAAGTCCTCCCAGGCACCACCGTAG | 1425 | 0.4646 | MLDLNLNAELTQNDDSVMLLEKVPQASSGTSNSSIVNAEGSSNITGDDDSCSTRAGGVFTFQFGILKVEKGTDAVATKELFPVSAGNWPHGESSAMLIPARKSVMDLSLDQRIGGENGVAQVPQRPQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVEYEEDMNQMKNLSKEEFVHILRRHSNGFSRGSSKYRGVTLHKCGRWEARMGQLLGKKYVYLGLFDSEVEAARAYDKAAIKCNGREAMTNFEPSTYGSEIKPEAINEGGSHNLDLNLGMATPGHEPKENRGYRQFQTTPYNLYPGRNLKMETNANSVLSDLSLKKLVATEQRPSMWNATYSSFFPNEERAERIGIDPSKGPPYWAWQAHSQGTASPVPQFSTAASSGFSISATFPPNSIFQTQPMNSIPLRFTPSIAPGSNASQYYYQVKSSQAPP | 474 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi2g07094 | 474 | MobiDBLite | consensus disorder prediction | 115 | 142 | - | - | |
Vivi2g07094 | 474 | PRINTS | Ethylene responsive element binding protein signature | 272 | 292 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | PRINTS | Ethylene responsive element binding protein signature | 234 | 245 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | FunFam | AP2-like ethylene-responsive transcription factor | 140 | 199 | - | - | |
Vivi2g07094 | 474 | CDD | AP2 | 141 | 196 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 110 | 328 | - | - | |
Vivi2g07094 | 474 | SUPERFAMILY | DNA-binding domain | 140 | 197 | IPR016177 | GO:0003677 | |
Vivi2g07094 | 474 | ProSiteProfiles | AP2/ERF domain profile. | 141 | 197 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | SUPERFAMILY | DNA-binding domain | 232 | 291 | IPR016177 | GO:0003677 | |
Vivi2g07094 | 474 | Gene3D | AP2/ERF domain | 140 | 199 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | Gene3D | AP2/ERF domain | 232 | 291 | IPR036955 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | FunFam | AP2-like ethylene-responsive transcription factor | 232 | 292 | - | - | |
Vivi2g07094 | 474 | Pfam | AP2 domain | 141 | 189 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | Pfam | AP2 domain | 232 | 282 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | CDD | AP2 | 232 | 292 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | SMART | rav1_2 | 141 | 203 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | SMART | rav1_2 | 233 | 296 | IPR001471 | GO:0003700|GO:0006355 | |
Vivi2g07094 | 474 | ProSiteProfiles | AP2/ERF domain profile. | 233 | 290 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vivi2g07094 | Vivi-Chr2 | 213306800 | 213310690 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi2g07094 | 1 | 474 | AP2-EREBP Transcription Factor Family | AT5G60120 | 43.080 | 1.23e-94 | 293 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Vivi2g07094 | AP2 | 1.5e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi2g07094 | K09284 | - | gmx:100777102 | 704.131 |