Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07084 ATGAAACCCCTCCCCAGAACTCGACCGTCTCCGTCCACCGGAACCGGCGACGGCTGGTCCGAGGAGGCCACATTCACACTCATCGACGCCTGGGGCAAACTTTACAAGACGCTTAACCCTAGAAACCTCCGTCAGTATCACTGGAAGGACGTTGCAAAAGCCGTCAACGACAATCACGCCTTCGGCAGAAAAGCGCGCCGCACTTTCGATCAGTGCAAAAGCCGCATCAACGCGCTCAGGAAGAGGTACGCTACCGAGAAAGCTAGGGTTTCTGATTCCGGCGATTACGATAACGCATGGCCGTTTTTCGACAAAATCAGTTCCGTCATTGGAGATCCTTTACCGGTGAGGAAGCTTTCGCCGCCGTCTGTCACTCCTGTTAGGGCTTCGGCATGGGCGCTCGCACCGGTTGGTCGTCGATCTCGGACTCAGAGTCAGAGCAGTCTGAAACGACCTGCGCCGGGGATGACATCGACTTCGGAGAGCTTGGATGAGTCGCGATTTAACCGAAATTTAGCTGCCTTTGCTGCTGCGGCTGCTGCAGCTGCGGAAGAAGAGATTGATGATTCGAATTCAGATAATTCAGATTCAGATGAGTGGGAGTTGAGCAATGAGAGCCAGAAGAGGAATAGGGGAAGAAATGATATGGAATTAGGGCATAGAGAGGTTGCAAGCGCTGCGAAGAAGTTTAGTGAGATACATGAGAGAGTGAACACGCAGATAAAAAATGTGGCTTTGGAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAGGATGCAGCTTCGTAAAAGCACACACTCAAAACACATGGATGATCTCTTAGCTCATTCCAAAAGTGGTTTAGATACTCAGTCTACCAACAGAAAGCGTAAACGTGGTCCCACACAAATGAAAAAGCTAGCAGTTATTGATGGACAAAAGATACCGATTGAATTTGATCAATTAACTGGTAAACCGTTGGGGGAAAACAAGACAAAGTTCAAGAGTTATTTGGGTTTCCTTAGTCGAAGCAAAATCAGTATTTTGATTAATGAATGGGATTCTGTAGATGAGGACGTCAAGGATGACATTTGGACAACCATCTTGGAAGTATGGGATGTTCCTAATTCTGGGTTCTTACGAAAGAAATTGATGTCATATGTGGGTGAACGGTGGAGGGGATTTAAGACTATTTTGACTTCCAAATATGTACATGGAGAGTATAGTGATAAATCTCCTCTTGAGGTCTATAGTTTTCTCAATGAAGAAATATGGGAGGCGTTTGTTCAATCGCGATTGGACCCTTCCTTTCAGGAGATAAGAAAGAAAGCGCAAATCAGTTCTTTTCTAAACAAACACCCTCACAGACTGTCTCGTGGGGGATATGAGTTGCTCCAGGAGAAGATAATGCAAGAGAAATCAAAACAAAAAGACGAATCATTGGGAGATTCAGTAGCTGCACCTCCATCTCCACCAACACGCCATGAACAATGGAAGAAAGCTCGGCAAAATGCATCAGGAGATTACATAACAGAGGACACACGCATTGTTGCCGAGAAAATTGATTCTCTTGTTGAAAAAGCATCTCAAGGAGCTTTTGTTCCACAAGGACGTAAAGATATTTTGGCAGAAGCCATTGGCCGACCTGACCACTCTGGTGGTGTTCGTGGTGTTGGTCGTGGTGTCGGTATTCGACAATACTTTGGGCCACAGTCACGTGAAGCCTCCACTCCATCTGTTTTTAGTAGCCAACAAATAGAGGCCATAAAAGTGGAGCTTACTCAACAAATTAGAGAGCAATTGATGCAGGATTTGTCATCTATGGGTTTCTCTAAGAATATACCAGCTTCTTCTCCTAATACCATTGTGCCTGCGAGCCCGAAGGGCAGTCACTCCATTGAGCCGCCTATAACAGAGGAGGATGAAATCCCAAAACAATGTGAATTGTATGTTGATAATTTAATTCATGCCGTGGCCTTTGGTAATGTTTACAAGTTAGGGCCCACCATACATAATCAAATGCTAGAAAATGATATGGTGAGGGTTGTGGTTAACGAGGTCCTAGATGCAAATGCTCAAGTGCCTATGCCCACAGATGAAGTGGAAACGGTTGGGCATGCTCTTAACAATTTCATTCAATGGCCGAAAAGACTTGTGCAAATTATTTCTGATAAGGATGCTGATGGATCCGGGGAAGAGGACGTTTCAGCCAAAAGCTTGGACCCTAAACTAGATTCCGTTCAACAATTGGTTTTAAAGGCAATGTGTATGTCAGAATCTATAAAGCTCGAATTGGAACACGAAAGGATGAAGTTTCTCTGGCTCTCACAGAGAGATATTATGGAATTGTGTATGGGTAAACAAGAGTTATCCATAACTATTCTACGACTGTGGTTAACGTATTTGAATCGCCTTTCTATTAATATGGGTAAGAGTGACCTGTATGGATTTATTGATCCATGTTTTATTCAAAGTCCACATGATCCAACTAAAGCTGAAACCTACATACAGAATAAGTTATACGATGATAAAAAAGAGTGTTACCTAGCTCCTTATCACAACAATCGTCAATGGCAATTGCTCATTGTTTGTCCTAAGAAGAATAATGTAGTATTCCTATGTTCGAAGGAAAGAAAGCCAGATAACAATATTGTTCGCACTATAGATACAGCTTTGGATGGATATCATAAGCGGCAAGGTGTTCAAAAGAAGAAGCCAACATGGAATGTCCCCGTCTGTCAAAGACAGCCTGGTACTTATGAAAGCGGCTACTATATTATGATACACATGTTGAACATTGTATCTGATGGTATTATTGATCCATGGAAAAAGAAGGTATTTGGAAATTCAGAACCATTCCATGAAGATGAACTTATAAACGTTCGACAACGTTTCGCTAGTTTTATTCTTGAGTATATGCTATAA 2907 0.4314 MKPLPRTRPSPSTGTGDGWSEEATFTLIDAWGKLYKTLNPRNLRQYHWKDVAKAVNDNHAFGRKARRTFDQCKSRINALRKRYATEKARVSDSGDYDNAWPFFDKISSVIGDPLPVRKLSPPSVTPVRASAWALAPVGRRSRTQSQSSLKRPAPGMTSTSESLDESRFNRNLAAFAAAAAAAAEEEIDDSNSDNSDSDEWELSNESQKRNRGRNDMELGHREVASAAKKFSEIHERVNTQIKNVALEKQKMQFSKDSQRMQLRKSTHSKHMDDLLAHSKSGLDTQSTNRKRKRGPTQMKKLAVIDGQKIPIEFDQLTGKPLGENKTKFKSYLGFLSRSKISILINEWDSVDEDVKDDIWTTILEVWDVPNSGFLRKKLMSYVGERWRGFKTILTSKYVHGEYSDKSPLEVYSFLNEEIWEAFVQSRLDPSFQEIRKKAQISSFLNKHPHRLSRGGYELLQEKIMQEKSKQKDESLGDSVAAPPSPPTRHEQWKKARQNASGDYITEDTRIVAEKIDSLVEKASQGAFVPQGRKDILAEAIGRPDHSGGVRGVGRGVGIRQYFGPQSREASTPSVFSSQQIEAIKVELTQQIREQLMQDLSSMGFSKNIPASSPNTIVPASPKGSHSIEPPITEEDEIPKQCELYVDNLIHAVAFGNVYKLGPTIHNQMLENDMVRVVVNEVLDANAQVPMPTDEVETVGHALNNFIQWPKRLVQIISDKDADGSGEEDVSAKSLDPKLDSVQQLVLKAMCMSESIKLELEHERMKFLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINMGKSDLYGFIDPCFIQSPHDPTKAETYIQNKLYDDKKECYLAPYHNNRQWQLLIVCPKKNNVVFLCSKERKPDNNIVRTIDTALDGYHKRQGVQKKKPTWNVPVCQRQPGTYESGYYIMIHMLNIVSDGIIDPWKKKVFGNSEPFHEDELINVRQRFASFILEYML 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07084 968 MobiDBLite consensus disorder prediction 201 218 - -
Vivi2g07084 968 MobiDBLite consensus disorder prediction 273 297 - -
Vivi2g07084 968 MobiDBLite consensus disorder prediction 186 200 - -
Vivi2g07084 968 MobiDBLite consensus disorder prediction 135 164 - -
Vivi2g07084 968 Gene3D Adenoviral Proteinase; Chain A 733 968 - -
Vivi2g07084 968 PANTHER OS10G0338966 PROTEIN-RELATED 303 802 - -
Vivi2g07084 968 Gene3D - 19 84 - -
Vivi2g07084 968 MobiDBLite consensus disorder prediction 139 164 - -
Vivi2g07084 968 MobiDBLite consensus disorder prediction 183 218 - -
Vivi2g07084 968 Pfam Myb/SANT-like DNA-binding domain 18 108 IPR044822 -
Vivi2g07084 968 SUPERFAMILY Cysteine proteinases 750 966 IPR038765 -
Vivi2g07084 968 MobiDBLite consensus disorder prediction 467 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07084 Vivi-Chr2 213070465 213075577 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07084 8 111 Trihelix Transcription Factor Family AT3G14180 45.192 1.92e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g07084 Myb_DNA-bind_4 3.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07084 - - vvo:131653800 1478.38