Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07083 ATGAAAACCCCCACCGGAACTCGACCTTCTCCGTCCACCGGACACGAAGACGGCTGGTCCGACGAGGCCACGTTCACACTCATCGACGTCTGGGGCAAACTTTACAAGAAGCTTAACCAAAAAAATTTCCTTCAGTCTCACTGGAAGGAGGTCGCAAAAGCCGTTAACAACCATCACGGCCACGACAGAAAAACGCGCCGCACTTACGTTCAGTGCAAAAGCCGAATCAACACGCTCAAGAAGAAGTATACGACCGAGAAGGCTAGGGTTTCTGATTCCAGCGATTACGATAATGTATGGCCGTTTTTCGAGAAACTTGATTCGTTCATTGGAGATAATTTACCGCTGAAGAATCTCTCTTCGCCGTTTGATCCTCCTGTTAAGGTTCCTGCATGGGTGCTCGCGCCGGTCGGTCGTCGATCTGGCACTCAGAGTCAAAGCAGTCAGAAACAACCCGTGCCAGCGACATCGTCCTCTTTCAAGAGCTTGGATGAATCAGGTTTTTGCCGGAATTTAGCTACCTTTGCTGCTGCGGCTGCTGCAGCCGCGGAAGCAGAGATTGATGATTCGAATTCGGATAATTCAGATTCAGATGAGTTGGAGTTGAGCAATGAGAGCAAGAAGAGGAAGAGGGGAAGAAATGATAATTCAGATTCAGATGAGTTGGAGTTGAGCAATGACATAGAGGTTGCAAGTGCTACAGAGAACTTTAGTGAGATACATGAGAGAGTGGACTCATCAAAGCAGAGAAAAAGTGTGGCTTTGGAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAGGACGCAGCTTCCGAAAAGCAACAACTCAAAACACATGGATGATCTATCACATCCTTCTCGAATTGGGTTGGATACTCAGTCTACCAATAGAAAGGGTAAACGTGGTGCCACAATAATGAAAAAGTTAGCACTTGACCGTATTGATGGACAAAGGATATCGATTGAATTTGATCAATCAATTGGAAAACCGTTAGGGGAAAACAAGCACAAGTTCAAGAGTTATGTGGGTTTCCTTGGTCGAAGCAAAGTCAGTATTTTGACGGAGGATTGGGATTCTGTTGATGAGGACGTGAAGAACGACATTTGGACATCCATCCTGGAAATATGGGATGTTCCTAATTCTGAGTTCTTGCGAAAGAAATGGATTTCATATGCAGGAGAACGTTGGAGGGCATTTAAGAATACTTTGACTTCTAGATATATACATGGGGATCTTAGTGATGAATCTCCTCTTGAGGTCTATAATTTTCTTAACGAAGAAATATGGCAGGCGTTTGTTCAAATGCGGCTGGACCCTTCCTTTCAGGAGAAAAGAAAGAAAGCGCAAATGGTCTCGGCCCATAATAAACACCCTCATAGATTGTCTCGTGGAGGGTATGAGTTGCTCCAGGAGAAGATGATTCAAGAGAAATTAAAAGAAAAGCAAGAATCATTGGGAGATTCAGTAGTTGCACCTCCATCTCCACCAGCACGCCACGAGCAATGGAAGAGAGCCCGACAAAAGCCATCAGGAGATTACATAACAGAGGACACACGCATTGTTGCCGAGAAAATTGATTCTCTAGTTGAAAAAACATCTCAAGGAGCTTTTGTTCCACAAGGACGTAAAGATATTTTGGTAGAAGCCCTTGGCCGACCTGAGCACCCTGGCCGTGTTCGTGGTGTTGGTCGAGGTGTCGGTATTCTGCAATACTTTGGACCACATTCACGTAATGCCTCCACCCCGCCTGTTATTAGTAGCAAACAAATAGAGGCCATAAAAATGGAGCTTACTCAACAGATTAAAGAGGAATTGATGCAAGATCTGACATCTATGGCTTTCTCTAAGAATTTCTCAACTTTTCCTCCTAATACCGTTGTACCTGGGAGCCCGAAGAATAGTCACTCTACTGTGCCGTCTATACAAGAAGAGGATGAAATCCCAGAACAATGTGAACTGTATGTTGATAATTTAATTCATGCCGTGGCATATGGTACTGTTTACAAGTTAGGACCCACCATACATAATCAATTGCTTGAAAAGGATTCGGTGAGGGTGGTGGTTAACGAGGTCCTAGATGCAAACGCTCAGGTGCCTATACCCACTGATGAGGTGGAAACGGTTGGGCATGCCCTTAACAATTTCATTCAGTGGCCGACAAGACTCGTGCAAATTGTTTCTGATAAGGATGTTGATGGATCTGGGGATGAGGACGTCTCACCCAAAAGGCTGGACCCTCAATTAGATTCTGTTCAACAATTGGTTTTAAAGGCAATGGGTATGTCAGAATCTATAAAGCTCGAATTAGAACACGATAGAATGAAGTTTCTTTGGCTCTCACAAAGAGATATTATGGAGTTGTGTATGGGTAAACAAGAGTTATCCATAACTATTTTACGATTGTGGTTAACGTATTTGAATCGCCTTTCTATTAATGTGGGTAAGGGTGACTTGTATGGGTTTATTGATCCATGTTTTATTCAAAATCAACACAATCCATCTAAAGCTGAAGCCTACATACAGAATAAGTTTTACGATGATAAAAAAGAGTGTTACCTAGCTCCGTATCACAGCAATCGTCATTGGCAATTGCTCATTATTTGTCCTAGGAAGAATCATGTAGTATTCCTAAGTTCTTTGGAAAGGAAGCCGGATAAAAATATTATTCACACTGTAGATTCTTGA 2688 0.4315 MKTPTGTRPSPSTGHEDGWSDEATFTLIDVWGKLYKKLNQKNFLQSHWKEVAKAVNNHHGHDRKTRRTYVQCKSRINTLKKKYTTEKARVSDSSDYDNVWPFFEKLDSFIGDNLPLKNLSSPFDPPVKVPAWVLAPVGRRSGTQSQSSQKQPVPATSSSFKSLDESGFCRNLATFAAAAAAAAEAEIDDSNSDNSDSDELELSNESKKRKRGRNDNSDSDELELSNDIEVASATENFSEIHERVDSSKQRKSVALEKQKMQFSKDSQRTQLPKSNNSKHMDDLSHPSRIGLDTQSTNRKGKRGATIMKKLALDRIDGQRISIEFDQSIGKPLGENKHKFKSYVGFLGRSKVSILTEDWDSVDEDVKNDIWTSILEIWDVPNSEFLRKKWISYAGERWRAFKNTLTSRYIHGDLSDESPLEVYNFLNEEIWQAFVQMRLDPSFQEKRKKAQMVSAHNKHPHRLSRGGYELLQEKMIQEKLKEKQESLGDSVVAPPSPPARHEQWKRARQKPSGDYITEDTRIVAEKIDSLVEKTSQGAFVPQGRKDILVEALGRPEHPGRVRGVGRGVGILQYFGPHSRNASTPPVISSKQIEAIKMELTQQIKEELMQDLTSMAFSKNFSTFPPNTVVPGSPKNSHSTVPSIQEEDEIPEQCELYVDNLIHAVAYGTVYKLGPTIHNQLLEKDSVRVVVNEVLDANAQVPIPTDEVETVGHALNNFIQWPTRLVQIVSDKDVDGSGDEDVSPKRLDPQLDSVQQLVLKAMGMSESIKLELEHDRMKFLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINVGKGDLYGFIDPCFIQNQHNPSKAEAYIQNKFYDDKKECYLAPYHSNRHWQLLIICPRKNHVVFLSSLERKPDKNIIHTVDS 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07083 895 MobiDBLite consensus disorder prediction 200 220 - -
Vivi2g07083 895 MobiDBLite consensus disorder prediction 239 263 - -
Vivi2g07083 895 MobiDBLite consensus disorder prediction 140 160 - -
Vivi2g07083 895 SUPERFAMILY Cysteine proteinases 755 887 IPR038765 -
Vivi2g07083 895 Pfam Plant transposase (Ptta/En/Spm family) 426 566 IPR004252 -
Vivi2g07083 895 Gene3D - 19 85 - -
Vivi2g07083 895 Gene3D Adenoviral Proteinase; Chain A 752 895 - -
Vivi2g07083 895 MobiDBLite consensus disorder prediction 187 226 - -
Vivi2g07083 895 MobiDBLite consensus disorder prediction 239 302 - -
Vivi2g07083 895 Pfam Myb/SANT-like DNA-binding domain 17 108 IPR044822 -
Vivi2g07083 895 PANTHER OS10G0338966 PROTEIN-RELATED 291 808 - -
Vivi2g07083 895 MobiDBLite consensus disorder prediction 482 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07083 Vivi-Chr2 213052568 213058352 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07083 8 182 Trihelix Transcription Factor Family AT3G14180 36.872 2.38e-25 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g07083 Transposase_24 6.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07083 - - vvo:131653800 1739.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07083 2 213052568 213058352 Vivi2g07083 2 213052568 213058352 ECH