Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07082 ATGAAAACCCCCACCGGAACTCGACCTTCTCCGTCCACCGGACACGAAGACGGCTGGTCCGACGAGGCCACGTTCACACTCATCGACGTCTGGGGCAAACTTTACAAGAAGCTTAACCAAAAAAATTTCCTTCAGTCTCACTGGAAGGAGGTCGCAAAAGCCGTTAACAACCATCACGGCCACGACAGAAAAACGCGCCGCACTTACGTTCAGTGCAAAAGCCGAATCAACACGCTCAAGAAGAAGTATACGACCGAGAAGGCTAGGGTTTCTGATTCCAGCGATTACGATAATGTATGGCCGTTTTTCGAGAAACTTGATTCGTTCATTGGAGATAATTTACCGCTGAAGAATCTCTCTTCGCCGTTTGATCCTCCTGTTAAGGTTCCTGCATGGGTGCTCGCGCCGGTCGGTCGTCGATCTGGCACTCAGAGTCAAAGCAGTCAGAAACAACCCGTGCCAGCGACATCGTCCTCTTTCAAGAGCTTGGATGAATCAGGTTTTTGCCGGAATTTAGCTACCTTTGCTGCTGCGGCTGCTGCAGCCGCGGAAGCAGAGATTGATGATTCGAATTCGGATAATTCAGATTCAGATGAGTTGGAGTTGAGCAATGAGAGCAAGAAGAGGAAGAGGGGAAGAAATGATAATTCAGATTCAGATGAGTTGGAGTTGAGCAATGACATAGAGGTTGCAAGTGCTACAGAGAACTTTAGTGAGATACATGAGAGAGTGGACTCATCAAAGCAGAGAAAAAGTGTGGCTTTGGAGAAACAGAAGATGCAATTTTCAAAGGATTCTCAGAGGACGCAGCTTCCGAAAAGCAACAACTCAAAACACATGGATGATCTATCACATCCTTCTCGAATTGGGTTGGATACTCAGTCTACCAATAGAAAGGGTAAACGTGGTGCCACAATAATGAAAAAGTTAGCACTTGACCGTATTGATGGACAAAGGATATCGATTGAATTTGATCAATCAATTGGAAAACCGTTAGGGGAAAACAAGCACAAGTTCAAGAGTTATGTGGGTTTCCTTGGTCGAAGCAAAGTCAGTATTTTGACGGAGGATTGGGATTCTGTTGATGAGGACGTGAAGAACGACATTTGGACATCCATCCTGGAAATATGGGATGTTCCTAATTCTGAGTTCTTGCGAAAGAAATGGATTTCATATGCAGGAGAACGTTGGAGGGCATTTAAGAATACTTTGACTTCTAGATATATACATGGGGATCTTAGTGATGAATCTCCTCTTGAGGTCTATAATTTTCTTAACGAAGAAATATGGCAGGCGTTTGTTCAAATGCGGCTGGACCCTTCCTTTCAGGAGAAAAGAAAGAAAGCGCAAATGGTCTCGGCCCATAATAAACACCCTCATAGATTGTCTCGTGGAGGGTATGAGTTGCTCCAGGAGAAGATGATTCAAGAGAAATTAAAAGAAAAGCAAGAATCATTGGGAGATTCAGTAGTTGCACCTCCATCTCCACCAGCACGCCACGAGCAATGGAAGAGAGCCCGACAAAAGCCATCAGGAGATTACATAACAGAGGACACACGCATTGTTGCCGAGAAAATTGATTCTCTAGTTGAAAAAACATCTCAAGGAGCTTTTGTTCCACAAGGACGTAAAGATATTTTGGTAGAAGCCCTTGGCCGACCTGAGCACCCTGGCCGTGTTCGTGGTGTTGGTCGAGGTGTCGGTATTCTGCAATACTTTGGACCACATTCACGTAATGCCTCCACCCCGCCTGTTATTAGTAGCAAACAAATAGAGGCCATAAAAATGGAGCTTACTCAACAGATTAAAGAGGAATTGATGCAAGATCTGACATCTATGGCTTTCTCTAAGAATTTCTCAACTTTTCCTCCTAATACCGTTGTACCTGGGAGCCCGAAGAATAGTCACTCTACTGTGCCGTCTATACAAGAAGAGGATGAAATCCCAGAACAATGTGAACTGTATGTTGATAATTTAATTCATGCCGTGGCATATGGTACTGTTTACAAGTTAGGACCCACCATACATAATCAATTGCTTGAAAAGGATTCGGTGAGGGTGGTGGTTAACGAGGTCCTAGATGCAAACGCTCAGGTGCCTATACCCACTGATGAGGTGGAAACGGTTGGGCATGCCCTTAACAATTTCATTCAGTGGCCGACAAGACTCGTGCAAATTGTTTCTGATAAGGATGTTGATGGATCTGGGGATGAGGACGTCTCACCCAAAAGGCTGGACCCTCAATTAGATTCTGTTCAACAATTGGTTTTAAAGGCAATGGGTATGTCAGAATCTATAAAGCTCGAATTAGAACACGATAGAATGAAGTTTCTTTGGCTCTCACAAAGAGATATTATGGAGTTGTGTATGGGTAAACAAGAGTTATCCATAACTATTTTACGATTGTGGTTAACGTATTTGAATCGCCTTTCTATTAATGTGGGTAAGGGTGACTTGTATGGGTTTATTGATCCATGTTTTATTCAAAATCAACACAATCCATCTAAAGCTGAAGCCTACATACAGAATAAGTTTTACGATGATAAAAAAGAGTGTTACCTAGCTCCGTATCACAGCAATCGTCATTGGCAATTGCTCATTATTTGTCCTAGGAAGAATCATGTAGTATTCCTAAGTTCTTTGGAAAGGAAGCCGGATAAAAATATTATTCACACTGTAGATTCAGCCTTGGAGGGATATCATAAGCTGCAAGGTGTTCAAAATAAGAAGCCAGTATGGACTGTCCCAGTTTGTCAAAGACAACCTGTCAATTACGAGTGCGGCTACTATATTATGATACATATGTTAAACATTGTATCTAATGGTATTATTGATCCATGGAAAAAGAAGGTATTTGGAAATCCAGAACCATTCCATGAGGATGAACTTATAAACGTCCGACAACGTTGCGCAAGTTTTATTCTTGAGTATATTATATGA 2940 0.4262 MKTPTGTRPSPSTGHEDGWSDEATFTLIDVWGKLYKKLNQKNFLQSHWKEVAKAVNNHHGHDRKTRRTYVQCKSRINTLKKKYTTEKARVSDSSDYDNVWPFFEKLDSFIGDNLPLKNLSSPFDPPVKVPAWVLAPVGRRSGTQSQSSQKQPVPATSSSFKSLDESGFCRNLATFAAAAAAAAEAEIDDSNSDNSDSDELELSNESKKRKRGRNDNSDSDELELSNDIEVASATENFSEIHERVDSSKQRKSVALEKQKMQFSKDSQRTQLPKSNNSKHMDDLSHPSRIGLDTQSTNRKGKRGATIMKKLALDRIDGQRISIEFDQSIGKPLGENKHKFKSYVGFLGRSKVSILTEDWDSVDEDVKNDIWTSILEIWDVPNSEFLRKKWISYAGERWRAFKNTLTSRYIHGDLSDESPLEVYNFLNEEIWQAFVQMRLDPSFQEKRKKAQMVSAHNKHPHRLSRGGYELLQEKMIQEKLKEKQESLGDSVVAPPSPPARHEQWKRARQKPSGDYITEDTRIVAEKIDSLVEKTSQGAFVPQGRKDILVEALGRPEHPGRVRGVGRGVGILQYFGPHSRNASTPPVISSKQIEAIKMELTQQIKEELMQDLTSMAFSKNFSTFPPNTVVPGSPKNSHSTVPSIQEEDEIPEQCELYVDNLIHAVAYGTVYKLGPTIHNQLLEKDSVRVVVNEVLDANAQVPIPTDEVETVGHALNNFIQWPTRLVQIVSDKDVDGSGDEDVSPKRLDPQLDSVQQLVLKAMGMSESIKLELEHDRMKFLWLSQRDIMELCMGKQELSITILRLWLTYLNRLSINVGKGDLYGFIDPCFIQNQHNPSKAEAYIQNKFYDDKKECYLAPYHSNRHWQLLIICPRKNHVVFLSSLERKPDKNIIHTVDSALEGYHKLQGVQNKKPVWTVPVCQRQPVNYECGYYIMIHMLNIVSNGIIDPWKKKVFGNPEPFHEDELINVRQRCASFILEYII 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07082 979 MobiDBLite consensus disorder prediction 200 220 - -
Vivi2g07082 979 Pfam Plant transposase (Ptta/En/Spm family) 426 566 IPR004252 -
Vivi2g07082 979 MobiDBLite consensus disorder prediction 239 263 - -
Vivi2g07082 979 MobiDBLite consensus disorder prediction 140 160 - -
Vivi2g07082 979 Pfam Myb/SANT-like DNA-binding domain 17 108 IPR044822 -
Vivi2g07082 979 MobiDBLite consensus disorder prediction 187 226 - -
Vivi2g07082 979 SUPERFAMILY Cysteine proteinases 755 976 IPR038765 -
Vivi2g07082 979 Gene3D - 19 85 - -
Vivi2g07082 979 Gene3D Adenoviral Proteinase; Chain A 763 977 - -
Vivi2g07082 979 PANTHER OS10G0338966 PROTEIN-RELATED 281 808 - -
Vivi2g07082 979 MobiDBLite consensus disorder prediction 239 302 - -
Vivi2g07082 979 Pfam Ulp1 protease family, C-terminal catalytic domain 849 938 IPR003653 GO:0006508|GO:0008234
Vivi2g07082 979 MobiDBLite consensus disorder prediction 482 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07082 Vivi-Chr2 213051667 213058352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07082 8 182 Trihelix Transcription Factor Family AT3G14180 36.872 4.48e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vivi2g07082 Peptidase_C48 3.4e-05 CL0125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07082 - - vvo:131653800 1919.05