Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07033 ATGGGAATGAAGAGTACTGGTGGAGAAATAGTTCAAGTTCAAGGAGGTCACATTGTTAGAGCAACTGGCAGAAAAGATAGACATAGCAAGGTATACACTGCGAAAGGCCCTCGCGATCGGCGCGTTCGATTATCAGCGCATACCGCGATACAGTTCTACGATGTTCAAGATCGGCTCGGCTACGATAGGCCGAGTAAAGCGGTTGATTGGCTTATCAAGAAGGCTAAGTCTGCTATTGATAAGCTTGATGAGCTTCCTCCATGGAATCCAATTCAAAATGCAGCACAGGAGTTTCAAGAGGAAGAGAATAATAACAATAATGGTTTAGAATCAAGTGAAATGGTTGTTGCTGCAGAAAATTCAGAATCTTCTGGTTACAATTTGCAGCAGAATCATAACCATTCAGGTTTCATTCAATCAAGTATTGATAATGATGCTATAGCGTTTTTTCCGACGAGTTCCGTTGGCGATTCGATGAATTTTCAGAACTACTCTTCTGATATAATCTCAAGAACAAACAATTCAACACAGGATCTTGGTCTTTCTCTTCATTCATTCCAGGACAATTCAGGTTCTAATGATCAAACACTTTTTTCTGGTTCAACTCATGTTGGATTTGATGGTAATTATCATAGGATTGTGAATTGGAACAATGATCATCATGGAACAGAAACTGATATGAATATGAATATGAATATGAATAGAACAGGTTTCATGGTTAATAATTCGCCTGCGCCGTTTCTAGGCCAAGGTTCGGCCTTTTCCGCCCATAGGGGGACCCTTCAGTCCAGTTTTTCGCCTTCGCTTCGTCCTTGGAATGATATTCCAATGGCGGATTCGTCCGTGGATCATCATAACCAGAAATCTCAACAACAGGTTCACCATGGTTCAATCTTTGGTAGCAGGTTTTTGTCTGATGCTTTGACAGGTTTCGGTATTCCTGCTAGAATTCAAGGAGAAGATGGAGTTGGTTCGGACCAGCCATCGTCGTCTTCTAATTCTCATCACTAA 1011 0.4135 MGMKSTGGEIVQVQGGHIVRATGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLDELPPWNPIQNAAQEFQEEENNNNNGLESSEMVVAAENSESSGYNLQQNHNHSGFIQSSIDNDAIAFFPTSSVGDSMNFQNYSSDIISRTNNSTQDLGLSLHSFQDNSGSNDQTLFSGSTHVGFDGNYHRIVNWNNDHHGTETDMNMNMNMNRTGFMVNNSPAPFLGQGSAFSAHRGTLQSSFSPSLRPWNDIPMADSSVDHHNQKSQQQVHHGSIFGSRFLSDALTGFGIPARIQGEDGVGSDQPSSSSNSHH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07033 336 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 17 276 IPR005333 GO:0003700
Vivi2g07033 336 Pfam TCP family transcription factor 23 129 IPR017887 -
Vivi2g07033 336 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Vivi2g07033 336 MobiDBLite consensus disorder prediction 315 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07033 Vivi-Chr2 212240191 212242408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07033 8 336 TCP Transcription Factor Family AT3G15030 40.887 2.49e-69 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Vivi2g07033 TCP 1.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07033 - - gmx:100814907 426.402