Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07031 ATGGCACAATTACCTCCCAAGATTCCAAACATGTCACCAAGTTGGCCAGATTTTTCAACTCATCAAAAAAACATTATGCCAACATCCATTTCATCCAACAACATTGTCTTCAACAGCAACGTTAACACAAACAATTATCATCAGAATCAAAACCCTTCATGGGTGGACGAGTTTCTCGACTTCTCGTCCGCCAGGCGGGGAGCTCACCGTCGGTCTGTCAGCGACTCCGTTGCGTTCCTAGAATCGCCAATGCTCGATGATTGCAGCGGGAAAAATGGTGAAAATGAAAACAACATTAATGATGATGACCATGAGTTCGACAAGTTTGATGATGAGCAGTTTATGTCCATGTTCAACGATGAAATAGCTGGTGTGCATAACATGCCGCCGATATTGTCCTCGTCGAATGCTTCGAGTCCTTCTGATCAGAACTTTGTCAATAATGAGAATGAGAATGAGATGATAAATAAGCAAGAAGAGAAGAAGGAGAATGATTTGAGAGAGATGAAGAAAGAGGAAGATGATGAGAAGCAGTTGAAAAATGAACCTGATGAGGTTGAAAGCCAATGCAAACAGGAAAATTCACAGCCTCAAAATAATAACAACAACAATTCATCTTCTTCTAATGACAGAATCACCGATCCTAAGAGAGTTAAAAGAATCTTGGCGAATAGGCAATCAGCGCAAAGATCGCGAGTGAGGAAGCTGCAATACATATCAGAGCTTGAACGAAGTGTAACTTCATTGCAGGCCGAAGTTTCAGTGCTTTCTCCACGAGTTGCATTTTTGGATCATCAACGTTTGCTTCTAAATGTTGACAATAGTGCTCTCAAGCAAAGAATTGCAGCCCTTGCTCAAGACAAGATTTTCAAAGATGCTCATCAAGAGGCACTGAAAAGGGAGATAGAGAGATTAAGACAAGTATATCACCATCAAAATCTCTCAAAGATGGAAAATGCAACAGGTTCACCTTTACCATCTCCATCACAACAAAAGCCATTATGTGATCCTCAGCCAGAAAATGAACAACTTCTCAATGGAAACACATGTGCAGCAGTGGCATCAAAAGAAAGGGTGGAAGAAACAGTTGTGTCTGCTTTAACTTAA 1107 0.4092 MAQLPPKIPNMSPSWPDFSTHQKNIMPTSISSNNIVFNSNVNTNNYHQNQNPSWVDEFLDFSSARRGAHRRSVSDSVAFLESPMLDDCSGKNGENENNINDDDHEFDKFDDEQFMSMFNDEIAGVHNMPPILSSSNASSPSDQNFVNNENENEMINKQEEKKENDLREMKKEEDDEKQLKNEPDEVESQCKQENSQPQNNNNNNSSSSNDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQNLSKMENATGSPLPSPSQQKPLCDPQPENEQLLNGNTCAAVASKERVEETVVSALT 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07031 368 Coils Coil 148 182 - -
Vivi2g07031 368 MobiDBLite consensus disorder prediction 317 347 - -
Vivi2g07031 368 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 219 234 IPR004827 GO:0003700|GO:0006355
Vivi2g07031 368 Gene3D - 215 287 - -
Vivi2g07031 368 MobiDBLite consensus disorder prediction 129 152 - -
Vivi2g07031 368 MobiDBLite consensus disorder prediction 190 211 - -
Vivi2g07031 368 Pfam bZIP transcription factor 216 259 IPR004827 GO:0003700|GO:0006355
Vivi2g07031 368 PANTHER BASIC LEUCINE ZIPPER 34 1 335 - -
Vivi2g07031 368 SMART brlzneu 212 276 IPR004827 GO:0003700|GO:0006355
Vivi2g07031 368 CDD bZIP_plant_RF2 217 267 IPR044759 GO:0003700|GO:0006355
Vivi2g07031 368 MobiDBLite consensus disorder prediction 153 189 - -
Vivi2g07031 368 MobiDBLite consensus disorder prediction 1 24 - -
Vivi2g07031 368 MobiDBLite consensus disorder prediction 129 215 - -
Vivi2g07031 368 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 214 266 IPR004827 GO:0003700|GO:0006355
Vivi2g07031 368 FunFam Basic leucine zipper 61 215 288 - -
Vivi2g07031 368 SUPERFAMILY Leucine zipper domain 216 270 IPR046347 GO:0003700|GO:0006355
Vivi2g07031 368 MobiDBLite consensus disorder prediction 86 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07031 Vivi-Chr2 212156415 212159794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07031 1 293 bZIP Transcription Factor Family AT3G58120 55.410 7.07e-99 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi2g07031 bZIP_1 3.8e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07031 - - vvo:131604354 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07031 2 212156415 212159794 Vivi2g07031 2 212156415 212159794 ECH