Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07021 ATGCTCACAATGTGGTTTGGAGAAAGTGAGGCAAACGTGAGGGAAATTTTTGACAAGGCTCGTGGTTCTGCTCCATGTGTCCTATTCTTTGACGAGCTTGACTTCATTGCAACTCAGAGAGGTAGTAGTGTAGGAGATGCTAGGGGTGCAGCTGACAGGGTTTTGAACCAGCTGCTAACAGAAATGGATGGGATGTCAGCAAAGAAAACTGTGTTCATCATTGGCGCTACTAACCGACCTGACATTATAGATCTAGCTCTTCTGCGTCCAGGGCGTTTAGACCAGTTGATTTATATCCCTCTCCCAGATGAAAATTCCCGTAGTCACATAATTAAAGCTTGCTTGAGAAAATCCCCCATCTCAAAAGATGTCGATATTAGAGCTCTTGCAAATTACACCCAAGGCTTTAGTGGTGCTGATATTACTGAGATTTGCCAGCGTGCATGCAAGTATGCCATTAGAGAGAATATTGAAAAGGGAGCAACTAACCAGAAACTTTCTAATGGATAA 510 0.4333 MLTMWFGESEANVREIFDKARGSAPCVLFFDELDFIATQRGSSVGDARGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDLALLRPGRLDQLIYIPLPDENSRSHIIKACLRKSPISKDVDIRALANYTQGFSGADITEICQRACKYAIRENIEKGATNQKLSNG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07021 169 Pfam ATPase family associated with various cellular activities (AAA) 3 101 IPR003959 GO:0005524|GO:0016887
Vivi2g07021 169 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 160 IPR027417 -
Vivi2g07021 169 Pfam AAA+ lid domain 123 159 IPR041569 -
Vivi2g07021 169 ProSitePatterns AAA-protein family signature. 71 89 IPR003960 GO:0005524|GO:0016887
Vivi2g07021 169 Gene3D - 102 163 - -
Vivi2g07021 169 Gene3D - 3 101 IPR027417 -
Vivi2g07021 169 PANTHER AAA-FAMILY ATPASE 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07021 Vivi-Chr2 212130677 212133675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07021 1 166 Calmodulin-binding Proteins AT3G56690 36.527 8.15e-28 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07021 K13525 - vvo:131653782 317.39