Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07020 ATGCTCACAATGTGGTTTGGAGAAAGTGAGGCAAACGTGAGGGAAATTTTTGACAAGGCTCGTGGTTCTGCTCCATGTGTCCTATTCTTTGACGAGCTTGACTTCATTGCAACTCAGAGAGGTAGTAGTGTAGGAGATGCTAGGGGTGCAGCTGACAGGGTTTTGAACCAGCTGCTAACAGAAATGGATGGGATGTCAGCAAAGAAAACTGTGTTCATCATTGGCGCTACTAACCGACCTGACATTATAGATCTAGCTCTTCTGCGTCCAGGGCGTTTAGACCAGTTGATTTATATCCCTCTCCCAGATGAAAATTCCCGTAGTCACATAATTAAAGCTTGCTTGAGAAAATCCCCCATCTCAAAAGATGTCGATATTAGAGCTCTTGCAAATTACACCCAAGGCTTTAGTGGTGCTGATATTACTGAGATTTGCCAGCGTGCATGCAAGTATGCCATTAGAGAGAATATTGAAAAGTCGCACTTCCAAGTAGAATCATATCTCAAGAAATTCAGCATATCTCTTGGAATGTGGAGAGTAGCAGCACTTCGTCGGCATGGAAATTAG 567 0.4356 MLTMWFGESEANVREIFDKARGSAPCVLFFDELDFIATQRGSSVGDARGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDLALLRPGRLDQLIYIPLPDENSRSHIIKACLRKSPISKDVDIRALANYTQGFSGADITEICQRACKYAIRENIEKSHFQVESYLKKFSISLGMWRVAALRRHGN 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07020 188 Gene3D - 3 101 IPR027417 -
Vivi2g07020 188 Pfam AAA+ lid domain 123 159 IPR041569 -
Vivi2g07020 188 Pfam ATPase family associated with various cellular activities (AAA) 3 101 IPR003959 GO:0005524|GO:0016887
Vivi2g07020 188 PANTHER AAA-FAMILY ATPASE 2 168 - -
Vivi2g07020 188 ProSitePatterns AAA-protein family signature. 71 89 IPR003960 GO:0005524|GO:0016887
Vivi2g07020 188 Gene3D - 102 161 - -
Vivi2g07020 188 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 159 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07020 Vivi-Chr2 212129478 212133676 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07020 1 160 Calmodulin-binding Proteins AT3G56690 37.888 3.97e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07020 K13525 - vvo:131653782 375.941