Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07009 ATGACTCAGTGTAGTTATCCTGAAGAGAATAATCATAGTGTTCTTATGGAGAGACGCAAAGATAGCATAATCAGAACTTGTCCTACTTGTGGTCATCATATCAAATGCCAAGATCAGGGTGCTGGAATTCATGAGCTACCTGGATTACCTGCTGGAGTGAAGTTTGATCCTACTGATCAAGAGATTCTCGAACATTTGGAAGCGAAAGTGAGGTCTGATATTCAAATGCTTCACCCTTTGATCGATGAATTCATCCCTACTCTTGAAGGAGAGAACGGAATCTGCTGCACTCATCCAGAGAAATTGCCAGGTGTAAGCAAAGATGGCTTGATCAGACATTTCTTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTGCACACAGATTCAGATGGAAGTGAAACAAGGTGGCACAAAACAGGTAAGACAAGACCGGTTTACGTGATCGGCAAATTAAAAGGATATAAGAAAATACTTGTTCTTTACACTAACTACAGAAAGCAAAGAAAGCCAGAGAAAACAAACTGGGTTATGCATCAATACCATCTTGGAAACAATGAAGAAGAGAAAGAAGGAGAATTGGTAGTTTCCAAAGTTTTCTATCAAACACAACCAAGACAATGTGGTTCATTGATGAAAGACTCGTCCTCGTTTTCCGATCAAAAACTAATCGGCGATCAAGTTGTTAACGAGGTGGTTAATCATAAAAACAGTGGATTTGTTGAATATTATAATACTTCTTTCATATCTTTTGATCAAGGGGAACAACATAGATCAAGCAATGCTCAAGTGATTTCTCATTTTCCTGTCCATGATGGTACTTCTTTCATTCCTTGA 855 0.3848 MTQCSYPEENNHSVLMERRKDSIIRTCPTCGHHIKCQDQGAGIHELPGLPAGVKFDPTDQEILEHLEAKVRSDIQMLHPLIDEFIPTLEGENGICCTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHTDSDGSETRWHKTGKTRPVYVIGKLKGYKKILVLYTNYRKQRKPEKTNWVMHQYHLGNNEEEKEGELVVSKVFYQTQPRQCGSLMKDSSSFSDQKLIGDQVVNEVVNHKNSGFVEYYNTSFISFDQGEQHRSSNAQVISHFPVHDGTSFIP 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07009 284 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 21 242 IPR044799 GO:0003700
Vivi2g07009 284 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Vivi2g07009 284 MobiDBLite consensus disorder prediction 128 144 - -
Vivi2g07009 284 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Vivi2g07009 284 MobiDBLite consensus disorder prediction 122 144 - -
Vivi2g07009 284 FunFam NAC domain-containing protein 73 58 212 - -
Vivi2g07009 284 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Vivi2g07009 284 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07009 Vivi-Chr2 211948749 211950472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07009 25 227 NAC Transcription Factor Family AT4G28500 77.941 4.29e-117 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi2g07009 NAM 5.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07009 - - gmx:100791648 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g07009 2 211948749 211950472 Vivi2g07009 2 211948749 211950472 ECH