Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g07007 ATGTCGAACCCATTGTTCCTCGTACTCCTGTTTCTGTTTTCTCTCTCACTATTTTCTTCTTCCACTTTCTCTCTCAACCAAGACGGTCTCTTTCTCCTTGAAGCTAAACTCCACCTCTCCGACCCTTCAAATTCCCTCTCCACCTGGAACCACCGCGACCCCACTCCCTGCAACTGGACCGGCATCCATTGCAACAACCTCACCTCCGCCGTCACCTCCATCAACCTCCCTGACTCCAACCTCTCCGGCCCCTTCCCCACTTCCCTCTGCCGCCTCTCTTCTCTCTCCTACCTCTCCCTCCCCAACAACAACCTCAACTCCACCCTCCCTTCCACTATCTCCGCCTGCACCACCCTCCGCCATCTCAACCTCTCCCTCAACCTCCTCTCCGGTCAACTCCCCTCCACTCTCTCCACTCTCCCCTTCCTCCAAACCCTCGACCTCTCCTTCAACAACTTCTCCGGCAACATCCCTCAATCCTTCGCCAACTTTCAACAACTCCAAACTCTCATCCTCGTCAACAACCTCTTCACCGACACAATCCCTTCCTCTCTAAGCAACATCTCATCTCTCAAACAGCTTCACCTCGCTTACAACACCTTCCTCTCTGAAGCTCCGATCCCAACCGAATTCGGAAGCCTCGTCAACCTTGAAAATCTATGGCTCTCCGGTTGCAACCTTATCGGTCCCATTCCCGTTTCTCTCCGTAAACTCGTTAACCTCAAGAACCTAGACTTGTCGCAGAACATGCTCAACGGAACCATACCGGAAACTGTGATATCCGGATTAACCAGCATTGTTCAAATCGAGCTTTATCAAAACTCTTTCTCCGGCGAGTTGCCGCGTGTCGGTGTATCCAACTTGACTCGGTTGGAACGTTTCGATGCTTCGGAAAATTACCTGACTGGGACGATTCCCGGTGAGTTGTGTCGTTTGAAGAAACTCGGGTCTCTTAATCTGTACAATAATCAACTCGAGGGTTCTCTGCCGGAGAGTTTAGCTTCGTCGGAGAGTCTATACATGCTTGTTTTGTTCAACAACTCACTCTCTGGGAATCTACCAACTGGTTTGGGGAGCAAGTCGAGGTTACAGATGCTTGATGTTTCGTTTAATCAATTTTCCGGTAACATTCCGGCGAGTCTGTGCTCTCAGGGAACGTTGCAGGAGCTGTTGATGATTTACAATTCGTTTTCCGGGGAAATTCCGGAGAGTCTTGGAAACTGTTTGAGCTTAACAAGGGTTAGGCTTGGGAACAATAACCTCTCTGGTGTTGTTCCTTCTGGTTTTTGGGGTTTGCCCCGTGTGTATCTACTTGAGCTTGTTGAGAATTCTTTTTCTGGGTCAATTTCTAATGCAATTTCAAGAGCTAGTAATCTTTCAATTTTGTTGATTTCAGGGAATAGGTTTAACGGGTCGATTCCCGAGTCAATCGGGTCATTGAATAATCTCGGAGTGTTTGTTGCTAGCGGTAATAGTCTTACCGGTCGGATTCCGAGCAGTATGGTTAAGTTAAGCCAATTGGGCAGGCTTGTTCTTAGGGATAATCAGTTTTCTGGAGAGATTCCTCATGGAGTTGGTGATTGGAAGCAGCTCAATGAGCTTGATTTAGCGAATAATAGGTTTGTTGGTGATATTCCAAGTGAATTAGGAACCTTGCCGGGGCTTAATTTTCTTGATCTTTCTGGTAATCTTCTTTCTGGTGAAATTCCAATGGAGCTGCAAAATTTGAAGCTTAATTTTTTAAACCTGTCGAATAACCAGTTATCAGGGGAAATTCCACCTCTTTATGCTAATGAGTATTTTAAGGACAGTTTTGTAGGAAATCCTGGTCTATGCGGCGATATCTCTGGATTGTGTCCGATTTCGGGCGAGAAGAGTAAGAATAAGAACTTTGTGTGGGTTTTCAGGTTCATATTTGTACTTGCTGGTGTTGTGTTAGTTGTCGGGGTGGCTTGGTTTTACTTCAAATTCTGGAATTTCAAGAAGACGAAGAAAGGATTTCATTTGTCGAAATGGAGGTCGTTTCATAAAATAGCGTTTAGTAAGTTTGAGATTGTGAAACTGATGAGTGAAGATAACGTGATAGGGAGTGGATCTTCCGGGAAGGTATACAAAGTGGTGCTGAGTAACGGAGAGACAGTTGCGGTGAAGAAATTATGGGGAGCAAAGAAGACGAAAAATGGAAATGTTGATGATCATGAAAAGGATGGATTTGAAGTCGAAGTTGACACATTGGGAAAGATTAGGCACAAGAATATTGTAAGGTTATGGTGTTGTTATAACAATGGTGATAGTAAGCTTCTGGTTTACGAGTACATGCCAAATGGAAGCATTGCTGATTTTTTGCATAGTAGCAAGAAAAACTTGTTGGATTGGCCAACTAGACTTAAAATCGCTATCGATGCAGCTGAAGGACTCTCTTATTTGCATCATGATTGTGTAGTTCCTATTGTTCACAGAGATGTAAAATCTAGTAACATTTTGCTAGATGAAGAATTTGGTGCAAAAATTGCTGATTTTGGAGTTGCGAAATTTGTTAGAGGTGTTGGCAATGGCACAGAAGAACCCATGTCTATGATTGCAGGATCTTATGGTTACATTGCACCAGAATATGCGTATACTCTTAGGGTGAATGAAAAGAGTGACATTTATAGTTTTGGTGTAGTGATTTTGGAGTTGGTAACTGGAAAACAAGCTATTGATCAAGAGTATGGAGAAAAAGATTTGGTAAAATGGGTTTCTTCGAAATTGAACGAGGAAGAACTGGATCAAGTGATTGATCGAACTCTTGATTATTCGAAATACAAAGAAGAAATAAACAAAGTACTCAAGTTGGGAATTGTTTGCACAAGCTCTCTTCCTATAAACCGTCCTTCGATGAGAAGTGTGGTGAAAATGCTGCATGAAGTAACATCAGGTTCCAAATCCAGAAGTGGAAGATTCTCTCCTTACTATCAAGAAATAGTCTCTGATAATGATCATTCGGAATCATAA 2994 0.4359 MSNPLFLVLLFLFSLSLFSSSTFSLNQDGLFLLEAKLHLSDPSNSLSTWNHRDPTPCNWTGIHCNNLTSAVTSINLPDSNLSGPFPTSLCRLSSLSYLSLPNNNLNSTLPSTISACTTLRHLNLSLNLLSGQLPSTLSTLPFLQTLDLSFNNFSGNIPQSFANFQQLQTLILVNNLFTDTIPSSLSNISSLKQLHLAYNTFLSEAPIPTEFGSLVNLENLWLSGCNLIGPIPVSLRKLVNLKNLDLSQNMLNGTIPETVISGLTSIVQIELYQNSFSGELPRVGVSNLTRLERFDASENYLTGTIPGELCRLKKLGSLNLYNNQLEGSLPESLASSESLYMLVLFNNSLSGNLPTGLGSKSRLQMLDVSFNQFSGNIPASLCSQGTLQELLMIYNSFSGEIPESLGNCLSLTRVRLGNNNLSGVVPSGFWGLPRVYLLELVENSFSGSISNAISRASNLSILLISGNRFNGSIPESIGSLNNLGVFVASGNSLTGRIPSSMVKLSQLGRLVLRDNQFSGEIPHGVGDWKQLNELDLANNRFVGDIPSELGTLPGLNFLDLSGNLLSGEIPMELQNLKLNFLNLSNNQLSGEIPPLYANEYFKDSFVGNPGLCGDISGLCPISGEKSKNKNFVWVFRFIFVLAGVVLVVGVAWFYFKFWNFKKTKKGFHLSKWRSFHKIAFSKFEIVKLMSEDNVIGSGSSGKVYKVVLSNGETVAVKKLWGAKKTKNGNVDDHEKDGFEVEVDTLGKIRHKNIVRLWCCYNNGDSKLLVYEYMPNGSIADFLHSSKKNLLDWPTRLKIAIDAAEGLSYLHHDCVVPIVHRDVKSSNILLDEEFGAKIADFGVAKFVRGVGNGTEEPMSMIAGSYGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGKQAIDQEYGEKDLVKWVSSKLNEEELDQVIDRTLDYSKYKEEINKVLKLGIVCTSSLPINRPSMRSVVKMLHEVTSGSKSRSGRFSPYYQEIVSDNDHSES 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g07007 997 SMART serkin_6 689 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07007 997 SMART LRR_typ_2 140 163 IPR003591 -
Vivi2g07007 997 SMART LRR_typ_2 312 335 IPR003591 -
Vivi2g07007 997 SMART LRR_typ_2 408 431 IPR003591 -
Vivi2g07007 997 SMART LRR_typ_2 504 528 IPR003591 -
Vivi2g07007 997 SMART LRR_typ_2 238 262 IPR003591 -
Vivi2g07007 997 SMART LRR_typ_2 92 116 IPR003591 -
Vivi2g07007 997 Gene3D Phosphorylase Kinase; domain 1 672 772 - -
Vivi2g07007 997 ProSitePatterns Serine/Threonine protein kinases active-site signature. 817 829 IPR008271 GO:0004672|GO:0006468
Vivi2g07007 997 Gene3D Ribonuclease Inhibitor 337 621 IPR032675 -
Vivi2g07007 997 Gene3D Transferase(Phosphotransferase) domain 1 773 986 - -
Vivi2g07007 997 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 25 185 - -
Vivi2g07007 997 ProSiteProfiles Leucine-rich repeat profile. 577 599 IPR001611 GO:0005515
Vivi2g07007 997 Gene3D Ribonuclease Inhibitor 25 184 IPR032675 -
Vivi2g07007 997 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Vivi2g07007 997 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 773 981 - -
Vivi2g07007 997 FunFam Receptor-like protein kinase HSL1 314 621 - -
Vivi2g07007 997 ProSiteProfiles Protein kinase domain profile. 689 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07007 997 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 191 969 - -
Vivi2g07007 997 SUPERFAMILY RNI-like 285 593 - -
Vivi2g07007 997 FunFam Receptor-like protein kinase HSL1 672 772 - -
Vivi2g07007 997 SUPERFAMILY L domain-like 40 373 - -
Vivi2g07007 997 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 186 279 - -
Vivi2g07007 997 ProSitePatterns Protein kinases ATP-binding region signature. 695 718 IPR017441 GO:0005524
Vivi2g07007 997 Pfam Protein kinase domain 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g07007 997 Gene3D Ribonuclease Inhibitor 189 261 IPR032675 -
Vivi2g07007 997 Gene3D Ribonuclease Inhibitor 262 336 IPR032675 -
Vivi2g07007 997 SUPERFAMILY Protein kinase-like (PK-like) 688 967 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g07007 Vivi-Chr2 211933214 211936652 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g07007 21 991 Receptor kinase-like Gene Family AT1G28440 58.097 0.0 1111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi2g07007 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g07007 - - gmx:100778128 1248.8