Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06985 ATGGCCAAAATGGGGTCTGGTTTTATGTTGTTTGTGTCAATGATGTTTCTCGTCTCTTCATTGTCATATGGTTACAAGTTTAACGTTGGTGGAAAAGATGGTTGGGCTGTGAAACCCTCTGCATGGTATTCTAAGTGGGCTCATTCACTAAGGTTTCAAATCAATGATTCACTTTATTTTAAGTATGATAAAGCAAATGATTCAGTGTTGGTGGTAAGTGGAAAAGACTATTATGCATGTAACACAAAGAATCCGATTAAGAAGTTGGAAGGTGGAGAGTCCGTTGTAAATTTGGATAGATCTGGTCCTTTTTACTTTGTAAGTGGAAATGTTGAGAATTGTGGTAAGGGTGAAAAGTTGTCTGTTGTTGTTGTGTCTCCGAGAGGCGGTCACAAGGATCATGGCCCGGCAAAATCACCATCAGTTTCGCCAGTTCACTCGCCTGCACCGTCGTGGAAGGCTCCGTCTCCCAGTTGGAAGGCTCCGTCTCCCAGTTGGAAGGCTCCTGCACCAGGTTGGACTGCTCCTGTTCCCGGACATAAGGCTCCATCACCAAGTGCACCAGGATGGAAGGCTCCGTCTCCCAGCTGGACTGCTCCCACTCCAGCATGGAAGGCTCCTGCACCAGGTTGGACTGCTCCTGCACCAGATCATAAGGCTCCATCACCAAGTGCACCAGGACTGAAAGCTCCATCACCCGGTCATGCGGCTCCCGCACCAGCATGGAAGGCTCCAGCACCAGTTTCAAAGGCTCCCGCACCAGGTTGGACTGTTCCCACCCCAGGTTCTGCACCAGGTTGGAAGGCTCAGGCTCCAGCACCTGAATGGAAAGCTCCTGCCCCTGCATCAGGGTCGACGGCTCCAACCCCCTCATGGACTCCTCCCTCACCCGGATCGAACGCTCCTGCACCGAGTTCACCTGGATGGACTTCTCCAACACCAAGTCCGGATTGGATTGCTCCCACACCAAGTGCCCCTGCATGGAATGCTCCAGCACCATCTCCTCGATCAAGCGGCTCGACAAGTTTAAGCGTTTCTTATGGTGTCATTGTTGCTGTGGCTTTGGTCTTAGCCAGCTTTCTTTTTTAG 1089 0.5096 MAKMGSGFMLFVSMMFLVSSLSYGYKFNVGGKDGWAVKPSAWYSKWAHSLRFQINDSLYFKYDKANDSVLVVSGKDYYACNTKNPIKKLEGGESVVNLDRSGPFYFVSGNVENCGKGEKLSVVVVSPRGGHKDHGPAKSPSVSPVHSPAPSWKAPSPSWKAPSPSWKAPAPGWTAPVPGHKAPSPSAPGWKAPSPSWTAPTPAWKAPAPGWTAPAPDHKAPSPSAPGLKAPSPGHAAPAPAWKAPAPVSKAPAPGWTVPTPGSAPGWKAQAPAPEWKAPAPASGSTAPTPSWTPPSPGSNAPAPSSPGWTSPTPSPDWIAPTPSAPAWNAPAPSPRSSGSTSLSVSYGVIVAVALVLASFLF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06985 362 Pfam Plastocyanin-like domain 35 117 IPR003245 GO:0009055
Vivi2g06985 362 MobiDBLite consensus disorder prediction 288 330 - -
Vivi2g06985 362 MobiDBLite consensus disorder prediction 126 339 - -
Vivi2g06985 362 FunFam Early nodulin-like protein 1 24 129 - -
Vivi2g06985 362 PANTHER BLUE COPPER PROTEIN 25 192 IPR039391 GO:0009055
Vivi2g06985 362 Gene3D - 24 128 IPR008972 -
Vivi2g06985 362 CDD OsENODL1_like 25 124 IPR041846 -
Vivi2g06985 362 ProSiteProfiles Phytocyanin domain profile. 25 126 IPR003245 GO:0009055
Vivi2g06985 362 SUPERFAMILY Cupredoxins 24 125 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06985 Vivi-Chr2 211338996 211340191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06985 8 172 Phytocyanin Superfamily AT4G28365 48.503 3.44e-43 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06985 - - psat:127086906 352.058