Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06981 ATGGATCCCAATCAACAAGCAGGTCAACCTTCTCCTTCAACAAAACTGGAAAGAAAGGTTGTTGAGAAAAATAGAAGAAACAAAATGAAGTCTCTCATTTCCAACCTTAACTCTCTTTGCCTTAACTATAATCCCAAGAGAGCTTTACCTGACCAAATAGATGATGCTAAAAACTACATTAAGAGCTTAGAGACAAATTTGAAATTGGCAAAGGAAAAGAAAGAAAGTTTAATGAGAAACAAGAGATCGCTTAGTGGTTGTTCGAGTTCGTCTGGATCAAAAGGAAGCAATAAATCACCAAGAATAGAGATTCATGAAAATGGTTCTTCTCTACAAGTGATTGTAACATGTGGGGTTGATGATAAGTTCATTTTCTATGAAATTCTAAGGATACTGCATGAAGATCACGTGGAGGTCATCTCTGCAAATTCTGCTTTGATAGGAGATTCGGTTATTCATGTTGTGCATGCTGAGAATCCGCAATCAGTGTTTCAATTTGGAGCGACCAAAGTAGGTGAGAGATTGAAAAGGTTTGTGAACGGATCAGTGAGAGAGGTGCAAATAATAGAGCCTCAGTTGTGGGATTCTGAGATTGGAAATGAGAGTTGGGATCTAAATTCTATAGTAAACAAGTGTTTTCCAAAAACTTTATGA 654 0.37 MDPNQQAGQPSPSTKLERKVVEKNRRNKMKSLISNLNSLCLNYNPKRALPDQIDDAKNYIKSLETNLKLAKEKKESLMRNKRSLSGCSSSSGSKGSNKSPRIEIHENGSSLQVIVTCGVDDKFIFYEILRILHEDHVEVISANSALIGDSVIHVVHAENPQSVFQFGATKVGERLKRFVNGSVREVQIIEPQLWDSEIGNESWDLNSIVNKCFPKTL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06981 217 MobiDBLite consensus disorder prediction 81 102 - -
Vivi2g06981 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 63 IPR011598 GO:0046983
Vivi2g06981 217 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 12 179 - -
Vivi2g06981 217 MobiDBLite consensus disorder prediction 74 102 - -
Vivi2g06981 217 MobiDBLite consensus disorder prediction 1 27 - -
Vivi2g06981 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 11 89 IPR036638 GO:0046983
Vivi2g06981 217 Coils Coil 53 80 - -
Vivi2g06981 217 Gene3D - 9 90 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06981 Vivi-Chr2 211178987 211180954 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06981 1 181 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.269 2.69e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06981 - - mtr:25487667 249.21