Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06974 ATGGACCACTATCATCAAGCCGGTCAACCTTGTTCTTCAACCAAAGTGGAAAGAAAGGTTGTTGAGAAAAATAGAAGAAATAAGATGAAGATTCTCTTTTCACACCTCAACTCTCTTTGCCCTAACTATAATTCCAAGGAAGCTTTGCCATTACCTGATCAAGTAGACCATGCTATAAACTATATTAAAAGTTTAGAGACAAATTTGAAATTGGCGAAGGAGAAGAAAGAAAGATTAATGAGAAACAAGAGGTCACGTAGTGGCTGCTTGAATTCTTCTGGAGGAAATGGAAGCATAAAATCACCAAAAATCGAAATTCATGAAAATGGTTCTTCCCTACAAGTTATTGTAACATGTGGGGCTGATGAACAGTTTATTTTCTGCGAAATTATGAGAATATTGCATGAAGATTACGTGGAGGTTATTTCTGCAAATTCTACACTGGTTGGAGATTCGGTTATTCATGTTGTGCATGCAGAGAATCCGCAATCATTGTTTCAATTTGGAGCGACCAAAGTAAGCGAGAGATTGAAAAGGTTTGTGAATGGATCTATGGGCGAGGCGCAATTAATAGTGCCTCAATTGTGGGATTTTGAGATTGGAAATGGGACTTGGGATCTAAATTCTGTAGTAAACAAGTGTCTACCAAATTCTATATGA 660 0.3727 MDHYHQAGQPCSSTKVERKVVEKNRRNKMKILFSHLNSLCPNYNSKEALPLPDQVDHAINYIKSLETNLKLAKEKKERLMRNKRSRSGCLNSSGGNGSIKSPKIEIHENGSSLQVIVTCGADEQFIFCEIMRILHEDYVEVISANSTLVGDSVIHVVHAENPQSLFQFGATKVSERLKRFVNGSMGEAQLIVPQLWDFEIGNGTWDLNSVVNKCLPNSI 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06974 219 MobiDBLite consensus disorder prediction 77 103 - -
Vivi2g06974 219 FunFam Transcription factor bHLH162 6 91 - -
Vivi2g06974 219 Gene3D - 10 91 IPR036638 GO:0046983
Vivi2g06974 219 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 13 181 - -
Vivi2g06974 219 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 13 90 IPR036638 GO:0046983
Vivi2g06974 219 Coils Coil 55 82 - -
Vivi2g06974 219 Pfam Helix-loop-helix DNA-binding domain 16 66 IPR011598 GO:0046983
Vivi2g06974 219 MobiDBLite consensus disorder prediction 85 103 - -
Vivi2g06974 219 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 13 65 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06974 Vivi-Chr2 211114708 211115754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06974 13 183 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 38.889 5.40e-33 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi2g06974 HLH 6.1e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06974 - - mtr:25487667 276.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06974 2 211114708 211115754 Vivi2g06974 2 211114708 211115754 ECH