Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06969 ATGCCTCAACCTAACCTCCTTATCACTCTTCTTCAATCTGTAACCATGATTCTATGTTGTGTTTCCACTACTGAATTTGTCTATAATACAAACTTCAACTCTACAAACATCAACTTATATGGAAATGCAACCATTAACAGATCCATTCTCACTCTCACTAATGAAAGTTTCTTCTCAATAGGTCGCGCTTTTTACCCGAAAAAAATACCTACCAAACTTCCCAACTCTTCCATTCTTCTACCTTTTGCTACCTCCTTCATTTTCTCTGTTGCCCCCGTTAAAAACTATATTGCAGGACATGCCCTTGCCTTCATATTCACATCTTCAAGAGGTCTAAATGGCACAACATCAGCCGAGTATTATGGTCTTTTCAATCTCACCAATGAAGGTAATCCTAATAACCATGTTGTTGGTATTGAATTTGATATAGTTAAAAACGAAGAAGAATTCAACGATATAAATGACAATCATGTTGGCGTTGACATAAATTCGCTTAGATCCTTAACTTCACATGAGGCTGGCTACTGGGGTGGAAAAGATGACAATGAATTTAAGGTGTTGAAGATAAAGAGTGGAGAAAATTATCAAGTATGGATTGAATTTTTGCATTCTCGTATAAACGTTACTATGGCTCGTGCAGGACAAAAGAGGCCTAATGTTCCTCTCATCAGTGTGAAGGTTAACCTTTCTGGGGTTCTTATGGATGAAACGTACGTTGGATTCTCTGCAGCCACAGGAAGATTAATCGACAGTAGTAGGATTCTTGCTTGGAGCTTTAGCAATACAAATTTTTCAATTGGTGATGCTTTAGTGACAGAAAACTTGCCTTCATTTGTCCCTTATAAGGGATGGTTTTCTCGAGCAAAAGTTATAGCTGTAGGAGTCACCAGTGTTGTCTGTGTGTTGATCATCGGTTGCGGTTGTGTAGTGTTTTTCATCCTATATAGGAAGGAAAAGGGAGCTACAGAAATTGAAGAGTGGGAACTAGAATATTGGCCACATAGGATTAGTTTCCAAGAGGTTCATGCAGCCACAAGAAGGTTCTCTGAAGAAAATGTGATTGCTGTAGGAGGGAATGGAAAGGTATATAAAGGGATTTTGCAAGGAGTTGAAGCTGCGGTGAAGAGAATCCCTCAAGAAAGAGAAGGTGGAATGAGAGAGTTTTTAGCAGAGGTTTCAAGCATAGGAAGAATGAAACATAGAAATTTAGTAGGGTTGAGAGGTTGGTGCAAAGAAGAAAAGGGAAGCTTGATTCTAGTTTATGACTTCATGAAAAATGGAAGTTTAGACAAATGGATCTTTGAGTGTGAAGAAGGAAAGATGCTAACTTGGGAAGAAAGGATTCAAGTTTTGAAAAATGTAGCTGAAGGGATTCTATACCTGCATGAAGGTTGGGAAGTTAAGGTCTTGCATAGAGATATCAAAGCAAGTAATGTTCTACTTGACAAGGACATGAATGCTAGGTTGGGAGATTTTGGATTGGCTCTTATGCATGAGCATCATGGACAAGTGGCCAGCACAACAAAAGTGCTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCGAACGGGAAGAGCGTCGACTATGTCTGATGTGTTCGGCTTTGGTGTATTGTTGTTAGAAGTAATTTGCGGACGAAGACCTATTGAAGTGCAAAAGCCAGGACTAATTGAATGGGTGAGGTCTCTGTTGATGGTTAACCAATTGCACAATGCTGTTGATGAAAGGTTGAAGGACAAAGGAGGATACCATATTGAGGAAGCTGAAAGATTGCTTCATTTGGGTTTGCAGTGTTCAAATTCAGACCCTAGTGTTAGACCAACAATGAGGCAGGTTGTGAAAATTCTGGAGGGAGAAATGACCAACATTGAGTGTGATGAAGAAAATATGGAGATGAGTTTGCTTGGAAAATTAAAATCAGCTGGGATGTGGTCTAAAACAATTAGTGCAGTTCCATATAGAGATCACCTTACTTTTGGAGAAGTTAAAAGTTATAACTCAAAGGCATCTACAAGTGGCTCAAGTGTTATTCAAGCATCAGATTCGGATATAATTTGGGAAGGCAGATAA 2073 0.3922 MPQPNLLITLLQSVTMILCCVSTTEFVYNTNFNSTNINLYGNATINRSILTLTNESFFSIGRAFYPKKIPTKLPNSSILLPFATSFIFSVAPVKNYIAGHALAFIFTSSRGLNGTTSAEYYGLFNLTNEGNPNNHVVGIEFDIVKNEEEFNDINDNHVGVDINSLRSLTSHEAGYWGGKDDNEFKVLKIKSGENYQVWIEFLHSRINVTMARAGQKRPNVPLISVKVNLSGVLMDETYVGFSAATGRLIDSSRILAWSFSNTNFSIGDALVTENLPSFVPYKGWFSRAKVIAVGVTSVVCVLIIGCGCVVFFILYRKEKGATEIEEWELEYWPHRISFQEVHAATRRFSEENVIAVGGNGKVYKGILQGVEAAVKRIPQEREGGMREFLAEVSSIGRMKHRNLVGLRGWCKEEKGSLILVYDFMKNGSLDKWIFECEEGKMLTWEERIQVLKNVAEGILYLHEGWEVKVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGVLLLEVICGRRPIEVQKPGLIEWVRSLLMVNQLHNAVDERLKDKGGYHIEEAERLLHLGLQCSNSDPSVRPTMRQVVKILEGEMTNIECDEENMEMSLLGKLKSAGMWSKTISAVPYRDHLTFGEVKSYNSKASTSGSSVIQASDSDIIWEGR 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06969 690 Gene3D - 22 267 - -
Vivi2g06969 690 SMART serkin_6 348 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06969 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Vivi2g06969 690 Pfam Protein kinase domain 350 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06969 690 SUPERFAMILY Protein kinase-like (PK-like) 326 618 IPR011009 -
Vivi2g06969 690 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246
Vivi2g06969 690 FunFam L-type lectin-domain containing receptor kinase S.4 22 267 - -
Vivi2g06969 690 Gene3D Transferase(Phosphotransferase) domain 1 424 638 - -
Vivi2g06969 690 CDD lectin_legume_LecRK_Arcelin_ConA 24 262 IPR001220 GO:0030246
Vivi2g06969 690 Gene3D Phosphorylase Kinase; domain 1 313 423 - -
Vivi2g06969 690 CDD STKc_IRAK 354 619 - -
Vivi2g06969 690 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 309 423 - -
Vivi2g06969 690 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06969 690 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 262 IPR013320 -
Vivi2g06969 690 PANTHER - 38 621 - -
Vivi2g06969 690 FunFam L-type lectin-domain containing receptor kinase S.4 424 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06969 Vivi-Chr2 210958079 210960941 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06969 21 565 Receptor kinase-like Gene Family AT4G04960 56.600 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi2g06969 Pkinase 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06969 - - gmx:100804553 1058.51