Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06968 ATGCCTAAACTTAAGTTCCTCATCACTCTTCTTCAATCTGTAACCATGATTCTATGTTGTATATCAACTACTGAATTTGTCTACAATACAAACTTCAACACCACAAACATCAACTTATATGGAAATGCCACTATTCACTCCTCCATTCTCACTCTCACTAATGGAAGTTTATTCTCAATAGGCCGAGCTTTTTTCCCGGAAAAAATACCTACCAAACTTCCCAACTCTTCCATTCTTCTCCCCTTTGCTACTTCCTTCATTTTCTCTGTTGCTCCCATCAAAAACTTTTTCACAGGATATGCCTTTGCCTTCATATTCACACCTTCAAGAGGTGTAAATGGAACAAAATCAGGAAAGTATAATGGTCTTTTCAATCTCACCAATGAAGGTAATGCTAACAACCATGCTTTCGGAATTGAGTTTGATATAAATAGAAACAAAAGATTATTCCATGATATAAATGATAATCATGTTGGTGTTGACGTAAACTCGCTTACGTCCTTAACTTCACATGAGGCTGGCTACTGGAGTGGAAAACATGACAATGAGTTTAAGGTTTTGAAGATAAAAAGTGGAGAAAATTATCAAGTATGGATTGAATTTATGCACTCGCAGATAAACGTTACTATGGCTCGGGCAGGACGAAAGAGGCCTCATGTTCCTCTCATCAGTGTGAATATTAACCTTTCTGGGGTTCTTATGGATGAAACTTATGTTGGATTCTGCGCAGCCACGGGCCAATTAGTAGACAGTAGTAGGATTCTTGCTTGGAGCTTTAGCAATACAAATTTTTCAATTGGTGATGCTTTAGTGACAGACAACTTGCCTTCATTTGTCCCTTGTAAGGGATGGTTTTCTCGAGCGAAAGTTATAACTGTAGGAGTCACCAGTGTTGTCTGTTTGTTAATCGTCGGTGGCTGTTATGTAGTGTTTTTCTTCATCCTATATAGTGGGGAAAAGGGAGAGGAAAAAATTGAAGAGTGGGAGCTAGAGTATTGGCCACATAGAATTAGTTTCCAAGAGATTGATGCAGCAACAAGAGGATTCTCTGAAGAGAATGTGATTACTGTTGGAGGGAATGGAAAGGTATATAAAGGGATTTTGCAAGGAGTTGAAGTTGCGGTCAAGAGAATCCCTCAAGAAAGAGAAGGTGGAATGAGAGAGTTTTTGGCAGAGGTTTCAAGCATAGGAAGAATGAAACATAGAAATTTAGTAGGATTGAGAGGTTGGTGCAAAGAAGAAAAAGGAAGCTTGATTCTAGTTTATGATTTCATGCACAATGGAAGTTTAGACAAATGGATCTTTGAATGTGAAGAAGGAAAGATGCTAACATGGGAAGAAAGGATTCAAGTTTTGAAAAATGTATCTGCAGGGATTCTATACTTGCATGAAAGTTGGGAAGTTACAGTCTTGCATAGAGATATCAAAGCAAGCAATGTTCTACTTGACAAGGACATGAATGCTAGATTGGGAGATTTTGGTTTGGCTCTTATGCATGAGCATCATGGACAAGTGGCCAGCACAACAAAAGTACTAGGGACATTAGGATACATTGCTCCGGAAGTGATTCGAACGGGGAGAGCGTCGACTATGTCAGATGTGTTCGGCTTTGGTATATTGTTGTTAGAAGTGATTTGCGGACGAAGACCTATTGAAGTGCATAAACCAGGACTAATTGAATGGGTGAGGTCTCTAATGATAGTTAGCCAGTTGCACAATGCTGTTGATGAAAGGTTGAAGGCCAAAGGAGGATACCCTATTGAGGAAGCTGAAAGATTGCTTCATTTGGGTTTGTTGTGTTCAAATTCAGACCCTAGTGTTAGACCAACAATGAGGCAGGTTGTGAAAATTCTGGAGGGAGAAATGACCAACATTGAGTGTGATGAAGAAAATATGGAGATGAGTTTGTTAGGAAAACTAAAATCAGCTGTAATATGGTCTAAAACCATAAGTGCAGTTCCATATAGAGATCACCTAACTTTTGAAGAAGTTAAAAGTTATAATTCAAAGGCATCTACAAGTGGCTCAAGTGTTATTCAAGCATCAGATTCAGATATCATTTGGGAAGGCAGATAA 2076 0.3878 MPKLKFLITLLQSVTMILCCISTTEFVYNTNFNTTNINLYGNATIHSSILTLTNGSLFSIGRAFFPEKIPTKLPNSSILLPFATSFIFSVAPIKNFFTGYAFAFIFTPSRGVNGTKSGKYNGLFNLTNEGNANNHAFGIEFDINRNKRLFHDINDNHVGVDVNSLTSLTSHEAGYWSGKHDNEFKVLKIKSGENYQVWIEFMHSQINVTMARAGRKRPHVPLISVNINLSGVLMDETYVGFCAATGQLVDSSRILAWSFSNTNFSIGDALVTDNLPSFVPCKGWFSRAKVITVGVTSVVCLLIVGGCYVVFFFILYSGEKGEEKIEEWELEYWPHRISFQEIDAATRGFSEENVITVGGNGKVYKGILQGVEVAVKRIPQEREGGMREFLAEVSSIGRMKHRNLVGLRGWCKEEKGSLILVYDFMHNGSLDKWIFECEEGKMLTWEERIQVLKNVSAGILYLHESWEVTVLHRDIKASNVLLDKDMNARLGDFGLALMHEHHGQVASTTKVLGTLGYIAPEVIRTGRASTMSDVFGFGILLLEVICGRRPIEVHKPGLIEWVRSLMIVSQLHNAVDERLKAKGGYPIEEAERLLHLGLLCSNSDPSVRPTMRQVVKILEGEMTNIECDEENMEMSLLGKLKSAVIWSKTISAVPYRDHLTFEEVKSYNSKASTSGSSVIQASDSDIIWEGR 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06968 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 18 262 IPR013320 -
Vivi2g06968 691 SMART serkin_6 349 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06968 691 Gene3D Transferase(Phosphotransferase) domain 1 425 639 - -
Vivi2g06968 691 CDD STKc_IRAK 358 620 - -
Vivi2g06968 691 Gene3D - 22 267 - -
Vivi2g06968 691 FunFam L-type lectin-domain containing receptor kinase V.9 22 269 - -
Vivi2g06968 691 SUPERFAMILY Protein kinase-like (PK-like) 327 619 IPR011009 -
Vivi2g06968 691 PANTHER - 41 622 - -
Vivi2g06968 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Vivi2g06968 691 Pfam Protein kinase domain 351 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06968 691 CDD lectin_legume_LecRK_Arcelin_ConA 39 262 IPR001220 GO:0030246
Vivi2g06968 691 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 312 424 - -
Vivi2g06968 691 FunFam L-type lectin-domain containing receptor kinase S.4 425 631 - -
Vivi2g06968 691 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06968 691 Gene3D Phosphorylase Kinase; domain 1 317 424 - -
Vivi2g06968 691 Pfam Legume lectin domain 24 263 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06968 Vivi-Chr2 210938400 210940663 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06968 21 566 Receptor kinase-like Gene Family AT4G04960 56.781 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi2g06968 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06968 - - gmx:100776006 1032.32