Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06917 ATGGGGTGTTGTGTGTCGACAAGCGATAGAAGCAATGATGACGCGGGGTCTTCGTCTTGTTTAGAATTGGGACTGTGTTGTCAGAAGAAAGAAAGGAAAGCATTCTCTGATCATGTTGTTTCTCTGCATAAGTTGTCGTCGTTACCGAATAGGATATTCGCGAATGGAAAGAGCCGGTCGTCTTGTATATTTACGCAGCAGGGGCGTAAGGGTGTTAATCAGGATGCCATGATTGTATGGGAAGATTTTGGGTCAGAAGATGTGATCTTTTGTGGTGTATTTGACGGCCATGGTCCGCACGGGCACCTTGTCGCGCGCAGAGTTAGGGATTCCTTGCCGGTGAAACTGCTCTCATTTTTGCATTCTTCTGAATTCGGTAAAGCTTGTATCAAGAGGGATATAAAACCTGAAAGTGGAGAGGCTGAGAATGATTTATCTGCTGAGAATGAGGTGAATTCTATGTGGAGAGAAGCTTTCTTGAAGGCATACAAAGCTATGGACAAAGAGTTGAAGTCTCATGCAAATTTGGACTGTTTTTGTAGTGGAAGCACAGCTGTGAGTGTAGTGAAACAAGGGTCGAATTTGTTCATGGGAAATATTGGTGATTCGAGAGCAATCATGGGATCCAAAGATAGCAACGACTTGATGGTTGCGATTCAGTTGACAGTTGATTTAAAACCTGATTTGCCAAGAGAAGAGGAAAGAATAAAAAGTTGCAAGGGTAGGGTATTTGCATTGCAAGATGAGCCAGAAGTTCCTAGGGTATGGTTACCGTTTGATAATGCACCTGGATTAGCAATGGCTAGAGCATTTGGAGATTTTTGCTTGAAGGAGTATGGTGTGATTTCTGTACCGGAGTTTACACACCGGCTTCTCACCGATAAAGACCAGTTCATTGTTCTTGCCTCGGACGGGGTATGGGATGTTTTGAGCAATGAAGAGGTGGTAGATATAGTATCATCAGCACCGAGTCGAACATCTGCAGCGAGGGTTCTGGTGGAATCCGCGGCACGAGAGTGGAAACTGAAATACCCGACTTCGAAAATGGATGATTGTGCGGTTGTGTGCCTATTTTTGGATGGAAAAATGGACTTAGAAGAATCCGACGGTGAAGAACAATGCTATTCTTCTGCAACAATCCAAAGCAACAATCATTCAGGTAATCCAGTTGAGTCAGACGATGGTAAAAAATCCGAGCCTTCTTTGCGAAGAAACTTCACTGTGAGAACCTTAGAAGAAAACGAGACATTTGGAGCAGGAAAAGGAGAATCTGTTGATATTGAAGATGGAACATCATCAGCAGAAGATCAAAACTGGTTAGGTCTAGAGGGTGTCACCCGAGTAAACTCACTCGTACAACTTCCTAGATTTTCTGACGAAAAGCCTAACTCTTGA 1395 0.4366 MGCCVSTSDRSNDDAGSSSCLELGLCCQKKERKAFSDHVVSLHKLSSLPNRIFANGKSRSSCIFTQQGRKGVNQDAMIVWEDFGSEDVIFCGVFDGHGPHGHLVARRVRDSLPVKLLSFLHSSEFGKACIKRDIKPESGEAENDLSAENEVNSMWREAFLKAYKAMDKELKSHANLDCFCSGSTAVSVVKQGSNLFMGNIGDSRAIMGSKDSNDLMVAIQLTVDLKPDLPREEERIKSCKGRVFALQDEPEVPRVWLPFDNAPGLAMARAFGDFCLKEYGVISVPEFTHRLLTDKDQFIVLASDGVWDVLSNEEVVDIVSSAPSRTSAARVLVESAAREWKLKYPTSKMDDCAVVCLFLDGKMDLEESDGEEQCYSSATIQSNNHSGNPVESDDGKKSEPSLRRNFTVRTLEENETFGAGKGESVDIEDGTSSAEDQNWLGLEGVTRVNSLVQLPRFSDEKPNS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06917 464 SMART PP2C_4 49 357 IPR001932 -
Vivi2g06917 464 CDD PP2Cc 59 359 IPR001932 -
Vivi2g06917 464 Gene3D - 50 361 IPR036457 -
Vivi2g06917 464 ProSiteProfiles PPM-type phosphatase domain profile. 60 359 IPR001932 -
Vivi2g06917 464 MobiDBLite consensus disorder prediction 379 439 - -
Vivi2g06917 464 FunFam probable protein phosphatase 2C 52 51 362 - -
Vivi2g06917 464 PANTHER PROTEIN PHOSPHATASE 58 357 IPR015655 GO:0004722|GO:0006470
Vivi2g06917 464 SUPERFAMILY PP2C-like 54 361 IPR036457 -
Vivi2g06917 464 Pfam Protein phosphatase 2C 85 336 IPR001932 -
Vivi2g06917 464 MobiDBLite consensus disorder prediction 390 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06917 Vivi-Chr2 209397922 209400506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06917 1 464 PP2C-type Phosphatase Gene Family AT1G03590 67.872 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06917 - - gmx:100788149 762.681