Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06908 ATGATGAGATCTACTTTACAGTACAAGAGAATGGAATTGAAAATTCAGTTACAAATTCTATTTGGATTGATGTTGATCTGTATAGTGCAGTTTTCACTTGCAGCTACCAATCCCTCTGATGTCGCTGCAATTAATAGATTATATGCTGCATTGGGCAATCCTGTACTTTCTGGGTGGGTTTCTAGCGCGGGAGACCCATGCGGAGAAGCGTGGCAAGGCGTTCAATGTAATGATACACTCATACAAGAAATAACTTTGGTTGGTGCAAATTTGGGAGGAGAACTTGGTGATAGCTTAGGAACGTTTGTTTCTATCAAATCAATAACTCTAAGCAACAACCACATTGGAGGAAGTATTCCATCGAGTTTGCCAGTCACCTTGCAAAACCTTTTCCTTTCGGGTAACCAGTTCAATGGAAGTATTCCCGTCTCTTTATCGACATTGACAGAACTTACTGACATGTCTCTTAATGATAATCTGCTGACTGGAGAAATACCAGACGCCTTTCAGTCTCTTACGCGATTGATCAATCTAGATTTATCTAATAATAATTTGAGTGGGGAATTGCCTCCATCTGTAGAGAGTTTGTCATCTATGACGACCTTAAATTTACAGAATAATAGCCTGTCTGGGACACTCGATGTTTTACAAGACCTTCCACTGACAGAATTGAATGTTGAGAACAACCAGTTTTCTGGATCAATACCTCCAAAGTTGTTAACCATCCCTAACTTTAGTAAAGATGGAAACCAATTTACTCCTGATGATGGTAATGCTACTATAGCACCTGCTCGTCCACCTCATTCTCCAATAACAGCTTCACCATCAGGAACTGTGGTTCCTGGGACACCATTTTTTGGACGGGTACCTCCTAAACATGCCAAGGGACCAACTGCATCCAAGAAATCAAGTTCTGAGAAATCGAAAACAAACACTAAAAGAGTGGTTTGGATTACCATTTCATGTGTATTGGGGTTTATCATCTTGGCACTGGCACTTGTTCTCTTTCTTCCAAGATGTAGCAAAAGGGAACGGGTTGACAGAACCTCCAAGCAACATCTGATTGGAGCATATGGAGGCGAAAGAACAAATCCTTGGAGGAATAATGGGGCTCTAGTCCAACCACCTAGTCAAACTGAGAAAGTAGTGAAAGGGGCTGTTGTAAGGCCAAAAGAAAACCGTCAAGCAGAGAAAAAAGAACAAAGAATGGAAACAATTCCAAAGCTATTAAGTCATGAGATTGATATGGGTGCAATAGATCTAGATTCATTGCCACCTTCACCCCCACCCCCACCCCCACCTCCTCCTCCACCACTTTCCGCTGAGAAGGTGGTTGTTGAGCCAACCACATTCCCTGGAGGGTCTAACATCAATCCTTCCAAAAGAAGTCCAGTTCCTCCCACCTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGACAATCTTATGGGATTAGGCATGTTGGGAAGTGTATATAGGGCAGAACTTCCTAATGGGAAGATACTTGCTGTGAAGAAACTAGACAAGAGAGTTACAGACCACCAAGAAGATGATGAGTTTCTTGAATTGGTAAACAATATCGACAGAATTCGGCATCCAAATGCTGTTGAGCTTATTGGGTACTGTGCGGAGCATGGGCAGAGGCTTCTGATCTATGAATACTGCTGTAATGGGTCGATGTATGAAGCACTTCATTCAGATGATGACTTCAAAACAAGACTGTCTTGGAATGCTCGTATTCGGATAGCACTTGGAGCAGCCAGAGCCTTAGAGTACTTGCATGAGCAATGTCAGCCACCTGTTATACACAGAAATTTCAAGTCTGCCAACATTCTACTTGATGAAGATCTATCTGTCCGTGTATCTGACTGTGGTTTGGCTCCATTAATTACTAAAGGTGCTGTACGTCAGCTCTCAGGACAGCTGCTAGCAGCTTATGGCTATGGGGCTCCAGAATTTGAGTCAGGAATTTACACCTACCAAAGCGACGTGTACAGCTTTGGAGTCGTTATGTTAGAACTTTTGACAGGCCGTCAGTCCTATGACAGGACACGCCCTCGAGGAGAGCAGTTTCTTGTAAGATGGGCAATTCCTCAACTTCATGATATTGATGCATTATCAAGGATGGTTGATCCTTCTCTAAATAAAGCTTACCCTGCCAAATCGTTATCAAATTTCGCAGACATTATTTCTAGATGTGTTCAGTCCGAGCCAGAATTCAGGCCAGCAATGTCAGAGGTGGTTTTGTATTTGCTAAATATGATAAGGAGAGAGTCTCAACAAAATGAATCAAATGAATGA 2325 0.4219 MMRSTLQYKRMELKIQLQILFGLMLICIVQFSLAATNPSDVAAINRLYAALGNPVLSGWVSSAGDPCGEAWQGVQCNDTLIQEITLVGANLGGELGDSLGTFVSIKSITLSNNHIGGSIPSSLPVTLQNLFLSGNQFNGSIPVSLSTLTELTDMSLNDNLLTGEIPDAFQSLTRLINLDLSNNNLSGELPPSVESLSSMTTLNLQNNSLSGTLDVLQDLPLTELNVENNQFSGSIPPKLLTIPNFSKDGNQFTPDDGNATIAPARPPHSPITASPSGTVVPGTPFFGRVPPKHAKGPTASKKSSSEKSKTNTKRVVWITISCVLGFIILALALVLFLPRCSKRERVDRTSKQHLIGAYGGERTNPWRNNGALVQPPSQTEKVVKGAVVRPKENRQAEKKEQRMETIPKLLSHEIDMGAIDLDSLPPSPPPPPPPPPPPLSAEKVVVEPTTFPGGSNINPSKRSPVPPTFAKSFTIASLQQYTNSFSQDNLMGLGMLGSVYRAELPNGKILAVKKLDKRVTDHQEDDEFLELVNNIDRIRHPNAVELIGYCAEHGQRLLIYEYCCNGSMYEALHSDDDFKTRLSWNARIRIALGAARALEYLHEQCQPPVIHRNFKSANILLDEDLSVRVSDCGLAPLITKGAVRQLSGQLLAAYGYGAPEFESGIYTYQSDVYSFGVVMLELLTGRQSYDRTRPRGEQFLVRWAIPQLHDIDALSRMVDPSLNKAYPAKSLSNFADIISRCVQSEPEFRPAMSEVVLYLLNMIRRESQQNESNE 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06908 774 ProSiteProfiles Protein kinase domain profile. 485 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi2g06908 774 SUPERFAMILY L domain-like 36 244 - -
Vivi2g06908 774 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 37 264 - -
Vivi2g06908 774 MobiDBLite consensus disorder prediction 249 310 - -
Vivi2g06908 774 SUPERFAMILY Formin homology 2 domain (FH2 domain) 428 448 - -
Vivi2g06908 774 SUPERFAMILY Protein kinase-like (PK-like) 459 759 IPR011009 -
Vivi2g06908 774 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 563 773 - -
Vivi2g06908 774 Gene3D Phosphorylase Kinase; domain 1 458 562 - -
Vivi2g06908 774 Gene3D Ribonuclease Inhibitor 37 255 IPR032675 -
Vivi2g06908 774 MobiDBLite consensus disorder prediction 423 441 - -
Vivi2g06908 774 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 756 - -
Vivi2g06908 774 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Vivi2g06908 774 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 454 562 - -
Vivi2g06908 774 Gene3D Transferase(Phosphotransferase) domain 1 564 774 - -
Vivi2g06908 774 Pfam Protein tyrosine and serine/threonine kinase 488 757 IPR001245 GO:0004672|GO:0006468
Vivi2g06908 774 MobiDBLite consensus disorder prediction 419 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06908 Vivi-Chr2 209246522 209254700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06908 26 766 Strubbelig Receptor Gene Family AT4G03390 61.286 0.0 850
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Vivi2g06908 PK_Tyr_Ser-Thr 7.7e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06908 - - mtr:25487613 1251.88