Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06902 ATGGCGAACGGGTTAGAGAAAGAAACTGGGTTCACCATGTTCAGTGATGAAGAGCTAAAGGATGTCAATGGGGTGAAGAGAGTTGGAGAATATGTTGAAGTAATGTGCGGTTGTACTAGCCATAGATATGGTGATGCTGTTGGATGGCTTAGGGTTTTTGTTAATGGTTACCTTGAAATCACCTGTGAATGCACCCCTGGTTGCCAAGAAGACAAATTGACTCCTGCTGCATTTGAGAAACATTCTGGAAGAGAAACGGCTAGAAAATGGAAGAACAATGTGTGGGTAATAGTTGATGGTGAGAAAGTTCCGTTGTATAAAACAGTTCTTCTCAAATACTACAATCAAGCGTTAAGAACAGCCAATGGATCACACAAATTGCAAAATGGACGAGGCCATCGTGACGAGTTCATCCGGTGTACTAGATGTAACAAAGAGCGTAGATTCCGGCTGAGAACTAAAGAAGATTGCCGCATTCATCATGATGCTTTGGCTGATCCAAATTGGAACTGTTCTAACCTTCCATATGACAAAATTACATGTGATAATGAAGAAGAAAGAGGAAGTCGAAGGGTTTATAGAGGATGCACTCGTACTGCAGCATGTAAAGGTTGCACTTCTTGTGTATGCTTTGGGTGTGAGATATGCCGTTTTTCAGATTGCACTTGCCAAACTTGTACTGACTTTACCAGGAATGCCAATGTCAAAGCTTGA 714 0.4174 MANGLEKETGFTMFSDEELKDVNGVKRVGEYVEVMCGCTSHRYGDAVGWLRVFVNGYLEITCECTPGCQEDKLTPAAFEKHSGRETARKWKNNVWVIVDGEKVPLYKTVLLKYYNQALRTANGSHKLQNGRGHRDEFIRCTRCNKERRFRLRTKEDCRIHHDALADPNWNCSNLPYDKITCDNEEERGSRRVYRGCTRTAACKGCTSCVCFGCEICRFSDCTCQTCTDFTRNANVKA 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06902 237 ProSiteProfiles SAND domain profile. 17 128 IPR000770 GO:0003677
Vivi2g06902 237 PANTHER PROTEIN ULTRAPETALA 1 10 234 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06902 Vivi-Chr2 209161166 209163231 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Vivi2g06902 SAND 5.2e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06902 - - gmx:100796203 436.032