LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi2g06898	ATGGCAGGTCAATTCACCGCCGCCGCTGCAGCCACAACAACCAACGTTTCTCTTCTCCGTCTCCCTTCTCTCTCGAATAAAGATTTGATCCCGGAAAGACGAGTTACATTCTACAAGAAAAGGAATTTTGCCATCAAAGCTCTTGCAGGCAGTTCTCTGGAAAGATCAGCTACGCGACTCACACCTGTTCCATCTTTACTATCTACTGATAACCGTGGTCATCTCTTACTCGGTGTTCCTATATCTCGAAGAGGCAGTTCTAGCACCCGTCCACAAGCATATATATACCATTGGTCTGGCTTTCGAATCCCTGCAAATGCTGAGAAGCCAGAATGGTGGTGGAGGACTTTATCCTGTATACCCTATCTAATAGCATTGCAGATGTCTGCAACTGGGTATTACATAGAGCCTTTACTTGATAAATATAAGTTCTTTGAAAATCTGATCTTTTATATCCCAGGAGCTGTCAATCGATTGCCAACCTGGTTCCCTATATTATACTGCTATTTGGCTATTGTGCTAGTGGTAAAAAATAGGGACTTTCCCGTTATCTTCAGATTCCATGTAATGGCGGGAATGCTACTAGAAATTGCTCTGCAGATAATATGGGTTGCAAGCAATTTCTTGCCGCTCATACACTTCAAGGGAACGCTTGGGATGTATTACTGGGCTGGTGTGGCGTTGGCATATATTCTTCTAACCATGCATTCCATCAGGTGTGCTCTTCTTGGTACATTTTCGAATATCCCTGTTATTAGTGAATCAGCTTTCCTTCATTCTCTATTTAGTTTAGGAGGGTTCCAGCGGCCGTTTTAG	816	0.4338	MAGQFTAAAAATTTNVSLLRLPSLSNKDLIPERRVTFYKKRNFAIKALAGSSLERSATRLTPVPSLLSTDNRGHLLLGVPISRRGSSSTRPQAYIYHWSGFRIPANAEKPEWWWRTLSCIPYLIALQMSATGYYIEPLLDKYKFFENLIFYIPGAVNRLPTWFPILYCYLAIVLVVKNRDFPVIFRFHVMAGMLLEIALQIIWVASNFLPLIHFKGTLGMYYWAGVALAYILLTMHSIRCALLGTFSNIPVISESAFLHSLFSLGGFQRPF	271

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi2g06898	271	PANTHER	PROTEIN TIC 20-II, CHLOROPLASTIC	32	260	IPR005691	-
	Vivi2g06898	271	Pfam	Chloroplast import apparatus Tic20-like	87	256	IPR005691	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi2g06898	Vivi-Chr2	209084425	209086519	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi2g06898	10	270	Chloroplast and Mitochondria Gene Families	AT4G03320	44.444	1.07e-76	233

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi2g06898	-		-	aprc:113869676	364.385