Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06879 ATGGCATATCCTACAAAACTTGATCATAAGTTTATTGAGCAAACTCTAATTATTCCATCATCAACAACATCAATTTCTCTTCCTCTCACATTCCTTGATTTACCTTTAGCAGGTCCAATTTACGTTAAACGTCAATTTTTCTATCGTTTTCCTCATACAACTGATTATTTTTACAAAACAACACTTCCATCTCTCAAACACTCTCTTTCTCTTACTCTTCAATATTTCTCCCCCCTCGCGGGAAACCTCATCTCTCCACCACCACCCAACAAACCGTATATCATTTGCACGCAAAAGGACTCTGTCGTCTTTACTATCATCGAATCTTTAGGCAATTTCAACCATCTTTCGGCCAATAACCACTCCAAAAATATCAAGGATTTTAATCACCTTGTTCAAAAATTAACACACAAAACAACCCTTGACCATAATGATATCGAAAATAACACCTTTATATTTCCTTTGTTGACTTTACAAGCCTCGATTTTCCCTAACCACGGTCTTTGCATCGCGATCACATATTGTCATGTAATGGATGATAATTGTTGTAATCATTTCATGAAAACATGGTCTTTTATACATGGAAATTGTGAAGTCGTTGACTTGAAGTCCTCACCTTGTTTTGATAGAAATATTTTGAAGGATCCAAAAGGGCTTGAGAATGTTTTCTTAAGAGACTACTTTGAAGAAAGAAAAACATGGAAGAATAAACTTATTGGTAAAACTCAAACTCAAGTTACCGAAGAAAAACACCAAGATTATTTTAAAGCAACTATTGATTTTGGAAAAGAAGAAATTGAAAGAATGAAAAGATGGGCACTCAATCAATGGAAGGAAAATGATCATGAGACTAAACCGCCGCAATTTTTATCTAAATTCGTTGTCACTTGTGGATTTATATGGTCTAGTTTGGTTAAAACAAGGTATAGAAACGATAACGATGACGATGAAAAGGAAGAGTATTTTCGTTTTGCAGGTGATTGTAGAGATAGACTTGGATACACAATACCAAAAGGATATTTTGGAAATTGTTTAACACTATGTCACGCAACGGCGAAGAGAAAGGATCTAAAAGGAGAAGATGGTTTTGTGAATGCGGTTAAGGTAATCGAAAGGGCGGTAAATGAGATGAAAAACGAACCTTTTAAAGACGCGACGGAATGGAGGGAGACATTTAAGAAGATGTATGAGTTTGGAAGTGTGTTGTTGGTAACTGGATCACCTAAGTTTAATGTTTATGAGATTGATTTTGGATTTGGAAAACCTGTTAAAGTTGAGATGATGCATTCGTTTAAATGTATGTCTATTGCTGAAAGTGGAGATAAAGAAGGTGGACTTGAAGTTGGATTGGTGTTTAAAAGTGGAGAATTTGAATATTTTTGTTCTGTCATTGAACAAGGACTTGAAACTTTTAAGTTCTAA 1422 0.3488 MAYPTKLDHKFIEQTLIIPSSTTSISLPLTFLDLPLAGPIYVKRQFFYRFPHTTDYFYKTTLPSLKHSLSLTLQYFSPLAGNLISPPPPNKPYIICTQKDSVVFTIIESLGNFNHLSANNHSKNIKDFNHLVQKLTHKTTLDHNDIENNTFIFPLLTLQASIFPNHGLCIAITYCHVMDDNCCNHFMKTWSFIHGNCEVVDLKSSPCFDRNILKDPKGLENVFLRDYFEERKTWKNKLIGKTQTQVTEEKHQDYFKATIDFGKEEIERMKRWALNQWKENDHETKPPQFLSKFVVTCGFIWSSLVKTRYRNDNDDDEKEEYFRFAGDCRDRLGYTIPKGYFGNCLTLCHATAKRKDLKGEDGFVNAVKVIERAVNEMKNEPFKDATEWRETFKKMYEFGSVLLVTGSPKFNVYEIDFGFGKPVKVEMMHSFKCMSIAESGDKEGGLEVGLVFKSGEFEYFCSVIEQGLETFKF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06879 473 PANTHER - 10 470 - -
Vivi2g06879 473 Pfam Transferase family 11 461 - -
Vivi2g06879 473 Gene3D - 9 239 IPR023213 -
Vivi2g06879 473 Gene3D - 251 471 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06879 Vivi-Chr2 208672540 208674518 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06879 49 460 Monolignol Biosynthesis Gene Families AT5G48930 22.558 2.53e-15 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06879 - - tpra:123894642 784.252