Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g06878 ATGGCCGAGGCAATAGGAGCAGAACATATGTTTATTGAGCAAACTTTTGTTTTTCCAGCAACAACAAGAACAAGAACAACGTCTCTTCCTCTAACATTTCTAGACTTGCCTTTTGCAGGTCCAAAATATGTTGAACGTCAATTCTTTTATCGCTTTCCTCATCCAACCAATCATTTTTGGCAGAAAACACTTCCATCTCTCAAACACTCTCTTTCCCTTACACTTCAACATTTCTCCCCCCTTGTTGGAAATCTCCATTGTCCCTCACCATCTAACAAACCTTTTATTCTTTGCACTCAAAATGATGCTTTAACTTTGACCGTGATTAAGTCCTCAGCAGATTTCAACAATCTCTCAACCAATGACCACCCAAAAAGTCTCAAAGATTTTAGTCACCTTGTTCCAAAATTGTCACAAAAAATAGACCTTGATGATAATGACACACTAATATTTTCATTGATGGCTTTACAAGTATCTTTTTTCCCCAACCAGGGTCTTTGCATTGCCATCACATATTGTCATGTAATGGATGATTACTTTTGCAATTATTTCATGAAATCTTGGTCTTTTATTCATAAAAAAGGTGAACTAGTTGACTTGAAAACATTACCTTGTTTTGACAGACATGTCTTGAGAGACCCAAAAGGACTTGAGGATGTTTTATTAAAAGGCTATTTTGAACAGAGGAAAATGTGGAAGAATAAATTACTTGTTAAAAGTCAAACAACAGAAGAACACCAAGATTGTGTGAAGACAACTATTATTTTTACAAAAGAGAAAATTGAGGGGATGAAAAGATGGATATTTAAGAAGTGGAAGACAAATCATAATGATATTGAAGCACCAAAATTTCTATCTAAATTTGTTATAACATGTGGTTTTGTTTGGGCCACTATGGTTAAAACAATAAATAGAAATATTTATGATGATGAAGATGAAAAAGATGAGTATTTTTGTTTCGTAGGTGATTGTAGGGAGAGACTAGGGTATCCAATACCAGAGGGTTATTTTGGGAATTGTTTAACATTATGTTTTGTAGCTGTTAAGAGAAAGGATTTGAAAGGAGAATATGGTTTTGTCAATGCTGTTAAAGCCATTCAAAATGCAATAACAGAGATGAAAAATGACCCATTAAAACATGCAGAAGAATGGGATGCTATGTTTAAAAAGGTTTTTATGTCAGGAAATCATTTGTTGGTAAGTGGATCCCCTAAGTTTAATGTCTACGAGACAGATTTTGAATTTGGAAATCCTATTAAAGTTGAGATGATGATGCATTCATCGAAGGATATGTCTCTTGCTGAAAGTGGAGACAAAGAAGGGGGACTTGAAGTTGGGTTGTTATTTAAAAGAGAGGAATTAGAATATTTATATTCTTTCATTGATCAAGGAATCAAAGCTTTGAAATTCTAA 1413 0.339 MAEAIGAEHMFIEQTFVFPATTRTRTTSLPLTFLDLPFAGPKYVERQFFYRFPHPTNHFWQKTLPSLKHSLSLTLQHFSPLVGNLHCPSPSNKPFILCTQNDALTLTVIKSSADFNNLSTNDHPKSLKDFSHLVPKLSQKIDLDDNDTLIFSLMALQVSFFPNQGLCIAITYCHVMDDYFCNYFMKSWSFIHKKGELVDLKTLPCFDRHVLRDPKGLEDVLLKGYFEQRKMWKNKLLVKSQTTEEHQDCVKTTIIFTKEKIEGMKRWIFKKWKTNHNDIEAPKFLSKFVITCGFVWATMVKTINRNIYDDEDEKDEYFCFVGDCRERLGYPIPEGYFGNCLTLCFVAVKRKDLKGEYGFVNAVKAIQNAITEMKNDPLKHAEEWDAMFKKVFMSGNHLLVSGSPKFNVYETDFEFGNPIKVEMMMHSSKDMSLAESGDKEGGLEVGLLFKREELEYLYSFIDQGIKALKF 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g06878 470 Pfam Transferase family 11 455 - -
Vivi2g06878 470 PANTHER - 12 467 - -
Vivi2g06878 470 Gene3D - 246 468 IPR023213 -
Vivi2g06878 470 Gene3D - 11 237 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g06878 Vivi-Chr2 208636573 208637985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g06878 13 461 Monolignol Biosynthesis Gene Families AT5G48930 23.491 5.89e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g06878 - - tpra:123894642 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06878 2 208636573 208637985 Vivi2g06878 2 208636573 208637985 ECH